Publications by Year: 2007

2007

AhnAllen CG, Nestor PG, McCarley RW, Shenton ME. The role of retrieval inhibition in the associative memory impairment of schizophrenia. Psychiatry Res. 2007;150(1):43–50. doi:10.1016/j.psychres.2006.07.001
To examine retrieval-induced forgetting (RIF) in schizophrenia, subjects studied category-exemplar words taken from either strong or weak categories, and then practiced retrieval by completing category word-stems on half of the word pairs. Patients had reduced recall and recognition, but showed the expected RIF effect of better recall of unpracticed items from unpracticed categories than for unpracticed items from practiced categories. By contrast, patients and controls showed differing RIF for recognition as a function of categorical dominance: whereas controls showed RIF only for dominant category exemplar word pairs, patients showed RIF for both dominant and weak categories. Different patterns of baseline practiced retrieval for weak associate pairs in schizophrenia may explain this finding. The results failed to support faulty RIF in the associative memory impairment of schizophrenia.
Pohl KM, Kikinis R, Wells WM. Active mean fields: solving the mean field approximation in the level set framework. Inf Process Med Imaging. 2007;20:26–37.
We describe a new approach for estimating the posterior probability of tissue labels. Conventional likelihood models are combined with a curve length prior on boundaries, and an approximate posterior distribution on labels is sought via the Mean Field approach. Optimizing the resulting estimator by gradient descent leads to a level set style algorithm where the level set functions are the logarithm-of-odds encoding of the posterior label probabilities in an unconstrained linear vector space. Applications with more than two labels are easily accommodated. The label assignment is accomplished by the Maximum A Posteriori rule, so there are no problems of "overlap" or "vacuum". We test the method on synthetic images with additive noise. In addition, we segment a magnetic resonance scan into the major brain compartments and subcortical structures.
Gilbertson MW, Williston SK, Paulus LA, Lasko NB, Gurvits T V, Shenton ME, Pitman RK, Orr SP. Configural cue performance in identical twins discordant for posttraumatic stress disorder: theoretical implications for the role of hippocampal function. Biol Psychiatry. 2007;62(5):513–20. doi:10.1016/j.biopsych.2006.12.023
BACKGROUND: A significant subgroup of individuals with posttraumatic stress disorder (PTSD) exhibits chronic, unremitting symptomatology that has also been associated with smaller hippocampal volume. The hippocampus plays a significant role in configural processing of contextual cues that facilitates context-appropriate extinction of conditioned fear. We test the hypothesis that hippocampus-based configural processing deficits are a pre-existing vulnerability factor for unremitting forms of PTSD. METHODS: Participants included male monozygotic twin pairs who were discordant for combat trauma. In 18 twin pairs the combat-exposed brother developed unremitting PTSD, whereas in 23 pairs the combat-exposed brother never developed PTSD. Participants were compared in the capacity to solve allocentric spatial processing tasks, and this performance was examined for its relationship to the severity of PTSD symptomatology and hippocampal volume. RESULTS: Although not completely differentiated from overall IQ, PTSD combat veterans demonstrated significantly impaired performance in configural processing relative to non-PTSD combat veterans. Despite having neither combat-exposure nor PTSD, the unexposed co-twins of combat veterans with PTSD displayed the same decrements as their brothers. Deficits were significantly related to PTSD severity and hippocampal volume. CONCLUSIONS: The current study provides the first evidence that the relevance of the hippocampus in PTSD might be related to pre-existing configural cue processing deficits that predispose individuals to develop unremitting forms of the disorder.
Sigfridsson A, Kvitting J-PE, Knutsson H, Wigström L. Five-dimensional MRI incorporating simultaneous resolution of cardiac and respiratory phases for volumetric imaging. J Magn Reson Imaging. 2007;25(1):113–21. doi:10.1002/jmri.20820
PURPOSE: To develop a new volumetric imaging method resolved over both the cardiac and respiratory cycles, to enable future physiological and pathophysiological studies of respiratory-related cardiac motion. MATERIALS AND METHODS: An acquisition scheme is proposed whereby the k-space acquisition order is controlled in real-time by the current cardiac and respiratory phases. To reduce eddy-current effects induced by sudden jumps in k-space, the acquisition order is further optimized by the use of a Hilbert curve trajectory in the k(y)-k(z) plane. A complete three-dimensional (3D) k-space is acquired for all combinations of cardiac and respiratory phases, yielding a five-dimensional (5D) data set after retrospective reconstruction. RESULTS: Left (LV) and right ventricular (RV) wall excursion was measured in a healthy volunteer. Diastolic LV diameter was shown to increase during expiration and decrease during inspiration, as expected from previous echocardiography studies. The LV volume was estimated for all cardiac and respiratory phases with the use of a fully 3D segmentation tool. The results confirmed that the diastolic LV volume increased during expiration and decreased during inspiration. CONCLUSION: With its ability to measure motion anywhere in the heart, the described technique provides a promising approach for in-depth description of interventricular coupling, including 3D ventricular volumes, during both the cardiac and respiratory cycles.
Sabuncu MR, Shenton ME, Golland P. Joint Registration and Clustering of Images. Med Image Comput Comput Assist Interv. 2007;10(WS):47–54. doi:10.1901/jaba.2007.10-47
We demonstrate an EM-based algorithm that jointly registers and clusters a group of images using an affine transformation model. The output is a small number of prototype images that represent the different modes of the population. The proposed algorithm can be viewed as a generalization of other well-known atlas construction algorithms, where the collection of prototypes represent multiple atlases for that population. Our experiments indicate that the employment of multiple atlases improves the localization of the underlying structure in a new subject.
Melonakos J, Niethammer M, Mohan V, Kubicki M, Miller J V, Tannenbaum A. Locally-Constrained Region-Based Methods for DW-MRI Segmentation. Proc IEEE Int Conf Comput Vis. 2007:1–8.
In this paper, we describe a method for segmenting fiber bundles from diffusion-weighted magnetic resonance images using a locally-constrained region based approach. From a pre-computed optimal path, the algorithm propagates outward capturing only those voxels which are locally connected to the fiber bundle. Rather than attempting to find large numbers of open curves or single fibers, which individually have questionable meaning, this method segments the full fiber bundle region. The strengths of this approach include its ease-of-use, computational speed, and applicability to a wide range of fiber bundles. In this work, we show results for segmenting the cingulum bundle. Finally, we explain how this approach and extensions thereto overcome a major problem that typical region-based flows experience when attempting to segment neural fiber bundles.
Onitsuka T, McCarley RW, Kuroki N, Dickey CC, Kubicki M, Demeo SS, Frumin M, Kikinis R, Jolesz FA, Shenton ME. Occipital lobe gray matter volume in male patients with chronic schizophrenia: A quantitative MRI study. Schizophr Res. 2007;92(1-3):197–206. doi:10.1016/j.schres.2007.01.027
Schizophrenia is characterized by deficits in cognition as well as visual perception. There have, however, been few magnetic resonance imaging (MRI) studies of the occipital lobe as an anatomically defined region of interest in schizophrenia. To examine whether or not patients with chronic schizophrenia show occipital lobe volume abnormalities, we measured gray matter volumes for both the primary visual area (PVA) and the visual association areas (VAA) using MRI based neuroanatomical landmarks and three-dimensional information. PVA and VAA gray matter volumes were measured using high-spatial resolution MRI in 25 male patients diagnosed with chronic schizophrenia and in 28 male normal controls. Chronic schizophrenia patients showed reduced bilateral VAA gray matter volume (11%), compared with normal controls, whereas patients showed no group difference in PVA gray matter volume. These results suggest that reduced bilateral VAA may be a neurobiological substrate of some of the deficits observed in early visual processing in schizophrenia.
Nakamura M, Nestor PG, McCarley RW, Levitt JJ, Hsu L, Kawashima T, Niznikiewicz M, Shenton ME. Altered orbitofrontal sulcogyral pattern in schizophrenia. Brain. 2007;130(Pt 3):693–707. doi:10.1093/brain/awm007
Orbitofrontal alteration in schizophrenia has not been well characterized, likely due to marked anatomical variability. To investigate the presence of such alterations, we evaluated the sulcogyral pattern of this ’H-shaped’ sulcus. Fifty patients with schizophrenia (100 hemispheres) and 50 age- and gender-matched control subjects (100 hemispheres) were evaluated using 3D high-spatial resolution MRI. Based on a previous study by Chiavaras and Petrides (2000), the sulcogyral pattern of the ’H-shaped’ sulcus, which forms the boundaries of major orbitofrontal gyri, was classified into three types (Type I, II and III, in order of frequency) within each hemisphere. Chi-square analysis was performed to compare the sulcogyral pattern, and categorical regression was applied to investigate clinical/cognitive associations. The control data replicated the orbitofrontal sulcogyral pattern reported by Chiavaras and Petrides (P = 0.90-0.95), where the distribution was significantly different between the left and right hemisphere (Type I: right > left, Type II, III: left > right, chi2 = 6.41, P = 0.041). For schizophrenics, the distribution differed significantly from controls (chi2 = 11.90, P = 0.003), especially in the right hemisphere (chi2 = 13.67, P = 0.001). Moreover, the asymmetry observed in controls was not present in schizophrenia (chi2 = 0.13, P = 0.94). Specifically, the most frequent Type I expression was decreased and the rarest Type III expression was increased in schizophrenia, relative to controls. Furthermore, patients with Type III expression in any hemisphere evinced poorer socioeconomic status, poorer cognitive function, more severe symptoms and impulsivity, compared to patients without Type III expression. In contrast, patients with Type I in any hemisphere showed better cognitive function and milder symptoms compared to patients without Type I. Structurally, patients with Type III had significantly smaller intra-cranial contents (ICC) volumes than did patients without Type III (t(40) = 2.29, P = 0.027). The present study provides evidence of altered distribution of orbitofrontal sulcogyral pattern in schizophrenia, possibly reflecting a neurodevelopmental aberration in schizophrenia. Such altered sulcogyral pattern is unlikely to be due to secondary effects of the illness such as medication. Moreover, the structural association between Type III and small ICC volume, observed in the patient group, may suggest that Type III expression could be part of a systematic neurodevelopmental alteration, given that the small ICC volume could reflect early reduction of cranial growth driven by brain growth. The observed contrasting association of Type III expression with poorer outcome, and that of Type I expression with better outcome, further suggests clinical heterogeneity, and possible differences in treatment responsiveness in schizophrenia.
Salvati A, Lynch I, Malmborg C, Topgaard D. Chemical shift imaging of molecular transport in colloidal systems: visualization and quantification of diffusion processes. J Colloid Interface Sci. 2007;308(2):542–50. doi:10.1016/j.jcis.2006.11.035
Magnetic resonance imaging with chemical shift resolution is demonstrated to provide detailed information about molecular transport on the macroscopic scale in complex colloidal systems. The concentrations of species with distinct 1H resonance lines can be quantified from spatially resolved, high-resolution, 1H nuclear magnetic resonance spectra. The method is demonstrated by experiments on three systems with multiple simultaneous transport processes where the diffusion coefficients depend on position and/or on the concentration of other species: (1) release of poly(ethylene glycol) and imidazole from a hydrogel into an external reservoir of water, (2) migration of acetic acid and tetramethylammonium ions in a highly concentrated water-in-oil emulsion with initially non-uniform concentration of solutes, and (3) release of tetramethylammonium ions loaded into a hydrogel triggered by the diffusion of methyl green into the gel matrix.