LMI : Publications : Publications by Raul San Jose Estepar

Publications by Raul San Jose Estepar


References only

2013 2012 2011 2010 2009 2008 2007 2006 2005 2004 2003 2001 2000


2013

Diffeomorphic point set registration using non-stationary mixture models
D. Wassermann, J. Ross, G. Washko, C. F. Westin, R. San Jose Estepar
2013 IEEE 10th International Symposium on Biomedical Imaging (ISBI 2013)
2013


2012

Optimal real-time estimation in diffusion tensor imaging
Pablo Casaseca-de-la-Higuera, Antonio Tristan-Vega, Santiago Aja-Fernandez, Carlos Alberola-Lopez, Carl-Fredrik Westin, Raul San Jose Estepar
Magnetic Resonance Imaging
2012


Lung deflation and oxygen pulse in COPD: results from the NETT randomized trial.
Carolyn E. Come, Miguel J. Divo, Raul San Jose Estepar, Frank C. Sciurba, Gerard J. Criner, Nathaniel Marchetti, Steven M. Scharf, Zab Mosenifar, Barry J. Make, Cesar A. Keller, Omar A. Minai, Fernando J. Martinez, MeiLan K. Han, John J. Reilly, Bartolome R. Celli, George R. Washko, NETT. Research Group
Respiratory medicine
2012
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Association Between Airway Caliber Changes With Lung Inflation and Emphysema Assessed by Volumetric CT Scan in Subjects With COPD.
Alejandro A. Diaz, Carolyn E. Come, James C. Ross, Raul San Jose Estepar, MeiLan K. Han, Stephen H. Loring, Edwin K. Silverman, George R. Washko, for the COPDGene Investigators
Chest
2012
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Statins and Pulmonary Fibrosis: The Potential Role of NLRP3 Inflammasome Activation
J. F. Xu, G. R. Washko, K. Nakahira, H. Hatabu, A. S. Patel, I. E. Fernandez, M. Nishino, Y. Okajima, T. Yamashiro, J. C. Ross, Raul San Jose Estepar, A. A. Diaz, H. P. Li, J. M. Qu, B. E. Himes, C. E. Come, K. D'Aco, F. J. Martinez, M. K. Han, D. A. Lynch, J. D. Crapo, D. Morse, S. W. Ryter, E. K. Silverman, I. O. Rosas, A. M. K. Choi, G. M. Hunninghake
American journal of respiratory and critical care medicine
2012
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2011

Gender Differences of Airway Dimensions in Anatomically Matched Sites on CT in Smokers
Yu-Il Kim, Joyce Schroeder, David Lynch, John Newell, Barry Make, Adam Friedlander, Raul San Jose Estepar, Nicola A. Hanania, George Washko, James R. Murphy, Carla Wilson, John E. Hokanson, Jordan Zach, Kiel Butterfield, Russell P. Bowler, COPDGene Investigators
COPD
2011


2010

The role of a computed tomography-based image registered navigation system for natural orifice transluminal endoscopic surgery: a comparative study in a porcine model
Gloria Fern\'andez-Esparrach, Raul San Jose Estepar, Carlos Guarner-Argente, Graciela Mart\'inez-Pall\'i, R. Navarro, C. Rodr\'iguez de Miguel, Henry C\'ordova, Christopher C. Thompson, Antonio M. Lacy, Luis Donoso, JR. Ayuso-Colella, A. Ginés, M. Pellisé, J. Llach, Kirby G. Vosburgh
Endoscopy
2010
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Hidden Markov Model for Quantifying Clinician Expertise in Flexible Instrument Manipulation
Jagadeesan Jayender, Raul San Jose Estepar, Keith Obstein, Vaibhav Patil, Christopher C. Thompson, Kirby G. Vosburgh
Medical Imaging and Augmented Reality
2010
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New Kinematic Metric for Quantifying Surgical Skill for Flexible Instrument Manipulation
Jagadeesan Jayender, Raul San Jose Estepar, Kirby G. Vosburgh
Information Processing in Computer-Assisted Interventions (IPCAI 2010)
2010
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Automatic Lung Lobe Segmentation Using Particles, Thin Plate Splines, and Maximum a Posteriori Estimation
James C. Ross, Raul San Jose Estepar, Gordon Kindlmann, Alejandro Diaz, Carl-Fredrik Westin, Edwin K. Silverman, George R. Washko
Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2010
2010
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Image Registered Natural Orifices Transluminal Endoscopy Surgery (IR NOTES): System design and initial experiments
Raul San Jose Estepar, Gloria Fern\'andez-Esparrach, Carlos Guarner-Argente, Henry C\'ordova, Antonio M. Lacy, C.C. Thompson, Kirby G. Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2010
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Treating Disease in the Abdomen: Can Registered Image Guidance Assist the Gastroenterologist and Abdominal Surgeon?
Kirby G. Vosburgh, Raul San Jose Estepar
International Journal of Computer Assisted Radiology and Surgery
2010
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Airway Count and Emphysema Assessed by Chest CT Imaging Predicts Clinical Outcome in Smokers
Alejandro A. Diaz, Clarissa Valim, Tsuneo Yamashiro, Raul San Jose Estepar, James C. Ross, Shin Matsuoka, Brian Bartholmai, Hiroto Hatabu, Edwin K. Silverman, George R. Washko
Chest
2010
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Relationship of emphysema and airway disease assessed by CT to exercise capacity in COPD
Alejandro A. Diaz, Brian Bartholmai, Raul San Jose Estepar, James Ross, Shin Matsuoka, Tsuneo Yamashiro, Hiroto Hatabu, John J. Reilly, Edwin K. Silverman, George R. Washko
Respiratory Medicine
2010
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Quantitative Assessment of Bronchial Wall Attenuation on Thin-Section CT: an Indicator of Airflow Limitation in Chronic Obstructive Pulmonary Disease
Tsuneo Yamashiro, Shin Matsuoka, Raul San Jose Estepar, Mark T. Dransfield, John J. Reilly, Hiroto Hatabu, George R. Washko
American Journal of Roentgenology
2010
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Collapsibility of Lung Volume by Paired Inspiratory and Expiratory CT Scans: Correlations with Lung Function and Mean Lung Density
Tsuneo Yamashiro, Shin Matsuoka, Brian J. Bartholmai, Raul San Jose Estepar, James C. Ross, Alejandro Diaz, Sadayuki Murayama, Edwin K. Silverman, Hiroto Hatabu, George R. Washko
Academic Radiology
2010
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Physiologic and Computed Tomographic Predictors of Outcome from Lung Volume Reduction Surgery
George R. Washko, Fernando J. Martinez, Eric A. Hoffman, Stephen H. Loring, Raul San Jose Estepar, Alejandro Diaz, Frank C. Sciurba, Edwin K. Silverman, MeiLan Han, Malcolm DeCamp, John J. Reilly, NETT. Research Group
American Journal of Respiratory and Critical Care Medicine
2010
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Pulmonary Hypertension and Computed Tomography Measurement of Small Pulmonary Vessels in Severe Emphysema
Shin Matsuoka, George R. Washko, Tsuneo Yamashiro, Raul San Jose Estepar, Alejandro Diaz, Edwin K. Silverman, Eric Hoffman, Henry E. Fessler, Gerard J. Criner, Nathaniel Marchetti, Steven M. Scharf, Fernando J. Martinez, John J. Reilly, Hiroto Hatabu for the National Emphysema Treatement Trial Research Group
American Journal of Respiratory and Critical Care Medicine
2010
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Quantitative CT Measurement of Cross-sectional Area of Small Pulmonary Vessel in COPD: Correlations with Emphysema and Airflow Limitation
Shin Matsuoka, George R. Washko, Mark T. Dransfield, Tsuneo Yamashiro, Raul San Jose Estepar, Alejandro Diaz, Edwin K. Silverman, Samuel Patz, Hiroto Hatabu
Academic Radiology
2010
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Identification of Early Interstitial Lung Disease in Smokers from the COPDGene Study
George R. Washko, David A. Lynch, Shin Matsuoka, James C. Ross, Shigeaki Umeoka, Alejandro Diaz, Frank C. Sciurba, Gary M. Hunninghake, Raul San Jose Estepar, Edwin K. Silverman, Ivan O. Rosas, Hiroto Hatabu
Academic Radiology
2010
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2009

Lung Extraction, Lobe Segmentation and Hierarchical Region Assessment for Quantitative Analysis on High Resolution Computed Tomography Images
James C. Ross, Raul San Jose Estepar, Alejandro D\'\iaz, C.-F. Westin, Ron Kikinis, Edwin K. Silverman, George R. Washko
Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2009
2009
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Intraoperative Ultrasound Probe Calibration in a Sterile Environment
Ramtin Shams, Raul San Jose Estepar, Vaibhav Patil, Kirby G. Vosburgh
Medical Image Computing and Computer-Assisted Intervention (MICCAI) 5th workshop on Augmented Environments for Medical Imaging and Computer-aided Surgery (AMI-ARCS), London, UK
2009
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Quantitative airway assessment on computed tomography in patients with alpha1-antitrypsin deficiency
Tsuneo Yamashiro, Shin Matsuoka, Raul San Jose Estepar, Alejandro Diaz, John Newell, Robert A. Sandhaus, Patricia Mergo, Mark L. Brantly, Sadayuki Murayama, John J. Reilly, Hiroto Hatabu, Edwin K. Silverman, George R. Washko
COPD:Journal of Chronic Obstructive Pulmonary Disease
2009
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Sampling and Visualizing Creases with Scale-Space Particles
Gordon L. Kindlmann, Raul San Jose Estepar, Stephen M. Smith, C.-F. Westin
IEEE Trans. Visualization and Computer Graphics
2009
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COPDGene Study Quality Assurance Phantom
Phil Judy, Raul San Jose Estepar, Eric Hoffman, David Lynch, (for the COPDGene investigators)
Medical Physics
2009


A MRI study of relative organ position in the upper abdomen for changes in patient orientation: application to image-registered endoscopic ultrasound
Raul San Jose Estepar, Bruno Madore, Mark Yarmarkovich, Kirby G. Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2009
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Dynamic CT scanner environment effects on a DC electromagnetic tracking system
Vaibhav Patil, Raul San Jose Estepar, Connor J. Walsh, Kirby G. Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2009
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Towards real time 2D to 3D registration for ultrasound-guided endoscopic and laparoscopic procedures
Raul San Jose Estepar, C.-F. Westin, Kirby Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2009
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Airway Wall Attenuation: A Biomarker of Airway Disease in Subjects with COPD
George R. Washko, Mark T. Dransfield, Raul San Jose Estepar, Alejandro Diaz, Shin Matsuoka, Tsuneo Yamashiro, Hiroto Hatabu, Edwin K. Silverman, William C. Bailey, John J. Reilly
Journal of Applied Physiology
2009
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CT Metrics of Airway Disease and Emphysema in Severe COPD
Woo Jin Kim, Edwin K. Silverman, Eric Hoffman, Gerald J. Criner, Zab Mosenifar, Frank C. Sciurba, Barry J. Make, Vincent Carey, Raul San Jose Estepar, Alejandro Diaz, John J. Reilly, Fernando J. Martinez, George R. Washko
Chest
2009
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Diffusion tractography of the fornix in schizophrenia
J. Fitzsimmons, M. Kubicki, K. Smith, G. Bushell, R. San Jose Estepar, C.-F. Westin, P.G. Nestor, M.A. Niznikiewicz, R. Kikinis, R.W. McCarley, M.E. Shenton
Schizophrenia Research
2009
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2008

Three-Dimensional Airway Measurements and Algorithms
Raul San Jose Estepar, John J. Reilly, Edwin K. Silverman, George R. Washko
Proceedings of the American Thoracic Society
2008
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Real time 2D to 3D registration for ultrasound-guided endoscopic procedures
Raul San Jose Estepar, C.-F. Westin, Kirby G. Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2008
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Airway Inspector: An Open Source Application for Lung Morphometry
Raul San Jose Estepar, George G. Washko, Edwin K. Silverman, John J. Reilly, Ron Kikinis, C.-F. Westin
First International Workshop on Pulmonary Image Processing, New York City, USA
2008
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Image Registration Assists Novice Operators in Ultrasound Assessment of Abdominal Trauma
Kirby G. Vosburgh, Jeffrey Stoll, Vicki Noble, Kilian Pohl, Raul San Jose Estepar, Barnabas Takacs
Studies in Health Technology and Informatics
2008
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2007

Diffusion Tractography of the Fornix in Male Schizophrenic Patients
J. Fitzsimmons, M. Kubicki, K. Smith, R. San Jose Estepar, C.-F. Westin, R. Kikinis, R. McCarley, ME. Shenton

2007
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Open-Source Environment for Interactive Finite Element Modeling of Optimal ICD Electrode Placement
Matthew Jolley, Jeroen Stinstra, David Weinstein, Steve Pieper, Raul San Jose Estepar, Gordon Kindlmann, Rob MacLeod, Dana H. Brooks, John K. Triedman
Functional Imaging and Modeling of the Heart
2007
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Local Structure Tensor for Multidimensional Signal Processing. Applications to Medical Image Analysis
Raul San Jose Estepar
2007
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Towards scarless surgery: An endoscopic ultrasound navigation system for transgastric access procedures
Raul San Jose Estepar, Nicholas Stylopoulos, Randy Ellis, Eigil Samset, Carl-Fredrik Westin, Christopher Thompson, Kirby Vosburgh
Computer Aided Surgery
2007
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Gender Differences in the Severity of CT Emphysema in COPD
Mark T. Dransfield, George R. Washko, Marilyn G. Foreman, Raul San Jose Estepar, John Reilly, William C. Bailey
Chest
2007
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Geodesic-Loxodromes for Diffusion Tensor Interpolation and Difference Measurement
Gordon Kindlmann, Raul San Jose Estepar, Marc Niethammer, Steven Haker, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'07), Brisbane, Australia
2007
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Natural Orifice Transluminal Endoscopic Surgery (NOTES): An Opportunity for Augmented Reality Guidance
Kirby G. Vosburgh, Raul San Jose Estepar
Studies in Health Technology and Informatics
2007
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EUS with CT improves efficiency and structure identification over conventional EUS
Kirby G. Vosburgh, Nicholas Stylopoulos, Raul San Jose Estepar, Randy E. Ellis, Eigil Samset, Christopher C. Thompson
Gastrointestinal Endoscopy
2007
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Interobserver Variability in the Determination of Upper Lobe-Predominant Emphysema
Craig P. Hersh, George R. Washko, Francine L. Jacobson, Ritu Gill, Raul San Jose Estepar, John J. Reilly, Edwin K. Silverman
Chest
2007
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2006

Complementary aspects of diffusion imaging and fMRI; I: structure and function.
R. Mulkern, P. Davis, S. Haker, R. San Jose Estepar, L. Panych, S. Maier, M. Rivkin
Magnetic Resonance Imaging
2006
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Accurate Airway Wall Estimation Using Phase Congruency
Raul San Jose Estepar, George G. Washko, Edwin K. Silverman, John J. Reilly, Ron Kikinis, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
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Towards Scarless Surgery: An Endoscopic-Ultrasound Navigation System for Transgastric Access Procedures
Raul San Jose Estepar, Nicholas Stylopoulos, Randy E. Ellis, Eigil Samset, Carl-Fredrik Westin, Chrisopsher Thompson, Kirby Vosburgh
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
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Novel real time tracking interface improves the use of laparoscopic and endoscopic ultrasound in the abdomen
Kirby G. Vosburgh, Nicholas Stylopoulos, Christopher C. Thompson, Randy E. Ellis, Eigil Samset, Raul San Jose Estepar
International Journal of Computer Assisted Radiology and Surgery
2006
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On Diffusion Tensor Estimation
M. Niethammer, Raul San Jose Estepar, Sylvain Bouix, Martha Shenton, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
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A Kernel-Based Approach for User-Guided Fiber Bundling using Diffusion Tensor Data
Raul San Jose Estepar, Marek Kubicki, Martha Shenton, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
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Image Quality Assessment based on Local Variance
Santiago Aja-Fernandez, Raul San Jose Estepar, Carlos Alberola Lopez, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
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2005

Riemannian Mean Curvature Flow
R. San Jose Estepar, S. Haker, C.-F. Westin
ISCV '05
2005
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Pull-push level sets: a new term to encode prior knowledge for the segmentation of teeth images
Rodrigo de Luis Garcia, Raul San Jose Estepar, Carlos Alberola-Lopez
Medical Imaging 2005: Image Processing
2005
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Local Structure Tensor for Multidimensional Signal Processing. Applications to Medical Image Analysis.
R. San Jose Estepar
PhD Dissertation
University of Valladolid, Spain
2005
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2004

Ein graphisches Modell zur Qualitätssicherung von Navigation
W. Freysinger, Raul San Jose Estepar, Ron Kikinis, F. Kral
Laryngo-Rhino-Otologie
2004


Robust Generalized Total Least Squares Iterative Closest Point Registration
R. San Jose Estepar, A. Brun, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
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Comparison of Single-shot Echo-planar and Line Scan Protocols for Diffusion Tensor Imaging
M. Kubicki, S. E. Maier, C.-F. Westin, H. Mamata, H. Ersner-Hershfield, R. San Jose Estepar, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Academic Radiology
2004
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Shape of the Caudate Nucleus and its Cognitive Correlates in Neuroleptic-Naive Schizotypal Personality Disorder
J. J. Levitt, C.-F. Westin, P. G. Nestor, R. San Jose Estepar, C. C. Dickey, M. M. Voglmaier, L. J. Seidman, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Biological Psychiatry
2004
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2003

A Theoretical Framework to Three-Dimensional Ultrasound Reconstruction from Irregularly-Sample Data
R. San Jose Estepar, M. Martin-Fernandez, P.P. Caballero-Martinez, C. Alberola-Lopez, J. Ruiz-Alzola
Ultrasound in Medicine and Biology
2003
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Freehand Ultrasound Reconstruction Based on ROI Prior Modeling and Normalized Convolution
R. San Jose Estepar, M. Martin-Fernandez, C. Alberola-Lopez, J. Ellsmere, R. Kikinis, C.-F. Westin
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Lecture Notes in Computer Science 2879, Montreal, Canada
2003
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Diffusion tensor visualization using random field correlation and volume rendering
Andreas Sigfridsson, Raul San Jose Estepar, Lars Wigstrom, Carlos Alberola-Lopez, Carl-Fredrik Westin
Proc. of th 9th International Workshop on Computer Aided Systems Theory, Las Palmas de Gran Canaria, Spain
2003


Shape Alignment based on Phase Spectrum and ICA
Raul San Jose Estepar, Carlos Alberola-Lopez, Juan Ruiz-Alzola, Ron Kikinis, Carl-Fredrik Westin
Computer Aided Systems Theory (EUROCAST'03), Las Palmas de Gran Canaria, Spain
2003


A Novel Gauss-Markov Random Field Approach for Regularization of Diffusion Tensor Maps
M. Martin-Fernandez, R. San Jose Estepar, C.-F. Westin, C. Alberola-Lopez
Ninth International Conference on Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
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A Novel Gauss-Markov Random Field Approach for Regularization of Diffusion Tensor Maps
M. Martin-Fernandez, R. San Jose Estepar, C.-F. Westin, C. Alberola-Lopez
Abstracts of the Ninth International Conference on Computer Aided Systems Theory (EUROCAST'03), Las Palmas de Gran Canaria, Spain
2003
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2001

Reshaping polygonal meshes with smoothed normals extracted from Ultrasound volume data : an optimization approach
Raul San Jose Estepar, Carlos Alberola-Lopez, Juan Ruiz
SPIE, San Diego, USA
2001
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Maximum Likelihood Contour Estimation using Beta-Statistics in Ultrasound Images
Marcos Martin-Fernandez, Raul San Jose Estepar, Carlos Alberola-Lopez
Proceedings of the IEEE-EURASIP Image and Signal Processing and Analysis (ISPA'01), Pula, Croatia
2001
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2000

Kalman filter technique applied to surface reconstruction and visualization from noisy volume data
Raul San Jose Estepar, Alberto Rivera, Marco Pinacho, Carlos Alberola-Lopez, Juan Ruiz
SPIE, San Diego, USA
2000
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