Journal Papers


References only

2008 2007 2006 2005 2004 2003 2002 2001 2000 1999 1998

2008

Age-related deficits in fronto-temporal connections in schizophrenia: A diffusion tensor imaging study
Gudrun Rosenberger, Marek Kubicki, Paul G. Nestor, Erin Connor, Georgia B. Bushell, Douglas Markant, Margaret Niznikiewicz, Carl-Fredrik Westin, Ron Kikinis, Andrew J. Saykin, Robert W. McCarley, Martha E. Shenton
Schizophrenia Research
2008
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Image Registration Assists Novice Operators in Ultrasound Assessment of Abdominal Trauma
Kirby G. Vosburgh, Jeffrey Stoll, Vicki Noble, Kilian Pohl, Raul San Jose Estepar, Barnabas Takacs
Studies in Health Technology and Informatics
2008

2007

Towards scarless surgery: An endoscopic ultrasound navigation system for transgastric access procedures
Raul San Jose Estepar, Nicholas Stylopoulos, Randy Ellis, Eigil Samset, Carl-Fredrik Westin, Christopher Thompson, Kirby Vosburgh
Computer Aided Surgery
2007
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Delineating white matter structure in diffusion tensor MRI with anisotropy creases
Gordon Kindlmann, Xavier Tricoche, Carl-Fredrik Westin
Medical Image Analysis
2007
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Diffusion Tensor Analysis with Invariant Gradients and Rotation Tangents
Gordon Kindlmann, Daniel B. Ennis, Ross T. Whitaker, Carl-Fredrik Westin
IEEE Transactions on Medical Imaging
2007
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Oriented Speckle Reducing Anisotropic Diffusion
Karl Krissian, Carl-Fredrik Westin, Ron Kikinis, Kirby Vosburgh
IEEE Trans Image Process. 2007
2007
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New Perspectives on the Sources of White Matter DTI Signal
Sharon Peled
IEEE Transactions on Medical Imaging
2007
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Automatic Tractography Segmentation Using a High-Dimensional White Matter Atlas
Lauren J. O'Donnell, Carl-Fredrik Westin
IEEE Transactions on Medical Imaging
2007
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Gender Differences in the Severity of CT Emphysema in COPD
Mark T. Dransfield, George R. Washko, Marilyn G. Foreman, Raul San Jose Estepar, John Reilly, William C. Bailey
Chest
2007
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A review of diffusion tensor imaging studies in schizophrenia
Marek Kubicki, Robert McCarley, Carl-Fredrik Westin, Hae-Jeong Park, Stephan Maier, Ron Kikinis, Ferenc A. Jolesz, Martha E. Shenton
Journal of Psychiatric Research
2007
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Preliminary results of nonfluoroscopy-based 3D navigation for neurointerventional procedures
Sonia Pujol, Kai Frerichs, Alexander Norbash, Ron Kikinis, Carl-Fredrik Westin
J Vasc Interv Radiol
2007
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The uncinate fasciculus and extraversion in schizotypal personality disorder: a diffusion tensor imaging study
Ronald J. Gurrera, Motoaki Nakamura, Marek Kubicki, Chandlee C. Dickey, Margaret A. Niznikiewicz, Martina M. Voglmaier, Robert W. McCarley, Martha E. Shenton, Carl-Fredrik Westin, Stephan E. Maier, Larry J. Seidman
Schizophrenia Research
2007
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Natural Orifice Transluminal Endoscopic Surgery (NOTES): An Opportunity for Augmented Reality Guidance
Kirby G. Vosburgh, Raul San Jose Estepar
Studies in Health Technology and Informatics
2007
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EUS with CT improves efficiency and structure identification over conventional EUS
Kirby G. Vosburgh, Nicholas Stylopoulos, Raul San Jose Estepar, Randy E. Ellis, Eigil Samset, Christopher C. Thompson
Gastrointestinal Endoscopy
2007
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Interobserver Variability in the Determination of Upper Lobe-Predominant Emphysema
Craig P. Hersh, George R. Washko, Francine L. Jacobson, Ritu Gill, Raul San Jose Estepar, John J. Reilly, Edwin K. Silverman
Chest
2007
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On evaluating brain tissue classifiers without a ground truth
S. Bouix, M. Martin-Fernandez, L. Ungar, M. Nakamura M.-S. Koo, R. W. McCarley, M. E. Shenton
NeuroImage
2007
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Sequential Anisotropic Wiener Filtering Applied to 3D MRI Data
M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola, C.-F. Westin
Magnetic Resonance Imaging
2007
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Comparison of fiber tracts derived from in-vivo DTI tractography with 3D histological neural tract tracer reconstruction on a macaque brain
Julien Dauguet, Sharon Peled, Vladimir Berezovskii, Thierry Delzescaux, Simon K. Warfield, Richard Born, Carl-Fredrik Westin
NeuroImage
2007
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Neocortical Gray Matter Volume in First Episode Schizophrenia and First Episode Affective Psychosis: A Cross-Sectional and Longitudinal MRI Study
M. Nakamura, D. F. Salisbury, Y. Hirayasu, S. Bouix, K. M. Pohl, T. Yoshida, M.S. Koo, M. E. Shenton, R. W. McCarley
Biological Psychiatry
2007

A Hierarchical Algorithm for MR Brain Image Parcellation
K. M. Pohl, S. Bouix, M. Nakamura, T. Rohlfing, R. W. McCarley, R. Kikinis, W. E. L. Grimson, Shenton, W. M. Wells
IEEE Transa on Medical Imaging
2007

Using the Logarithm of Odds to Define a Vector Space on Probablistic Atlases
K. M. Pohl, S. Bouix, M. E. Shenton, R. W. McCarley, W. E. L. Grimson, R. Kikinis, W. M.
Medical Image Analysis Press
2007

Prediction from off-grid samples using continuous normalized convolution
Kenneth Andersson, Carl-Fredrik Westin, Hans Knutsson
Signal Processing
2007

Retrieving Articulated 3-D Models Using Medial Surfaces
K. Siddiqi, J. Zhang, D. Macrini, A. Shokoufandeh, S. Bouix, R. Chen, S. Dickinson
Machine Vision and Applications
2007

2006

Orthogonal Tensor Invariants and the Analysis of Diffusion Tensor Magnetic Resonance Images
Daniel B. Ennis, Gordon Kindlmann
Magnetic Resonance in Medicine
2006
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Characterizing the Shape of Anatomical Structures with Poisson's Equation
H. Haidar, S. Bouix, J. J. Levitt, R. W. McCarley, M. E. Shenton, J. S. Soul
IEEE Transactions on Medical Imaging
2006

Smaller Neocortical Gray Matter and Larger Sulcal CSF Volumes in Neuroleptic-Naive Females with Schizotypal Personality Disorder
M.S. Koo, C. C. Dickey, H.J. Park, M. Kubicki, N. Y. Ji, S. Bouix, K. M. Pohl, M. E. Shenton J. J. Levitt M. Nakamura, R. W. McCarley
Archives of General Psychiatry
2006

Geometrically constrained two-tensor model for crossing tracts in DWI
Sharon Peled, Ola Friman, Ferenc Jolesz, Carl-Fredrik Westin
Magnetic Resonance Imaging
2006
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Diffusion Tensor Visualization with Glyph Packing
Gordon Kindlmann, Carl-Fredrik Westin
IEEE Transactions on Visualization and Computer Graphics (Proceedings Visualization / Information Visualization 2006)
2006
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Complementary aspects of diffusion imaging and fMRI; I: structure and function.
R. Mulkern, P. Davis, S. Haker, R. San Jose Estepar, L. Panych, S. Maier, M. Rivkin
Magnetic Resonance Imaging
2006
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Novel real time tracking interface improves the use of laparoscopic and endoscopic ultrasound in the abdomen
Kirby G. Vosburgh, Nicholas Stylopoulos, Christopher C. Thompson, Randy E. Ellis, Eigil Samset, Raul San Jose Estepar
International Journal of Computer Assisted Radiology and Surgery
2006
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Improving Deriche-style Recursive Gaussian Filters
Gunnar Farneback, Carl-Fredrik Westin
Journal of Mathematics in Imaging and Vision
2006

A Bayesian Approach for Stochastic White Matter Tractography
Ola Friman, Gunnar Farneback, Carl-Fredrik Westin
TMI
2006
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A new strategy for respiration compensation, applied toward 3D free-breathing cardiac MR imaging
Bruno Madore, Gunnar Farneback, Carl-Fredrik Westin, Maria Alejandra Duran Mendicuti
MRI
2006
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A Method for Clustering White Matter Fiber Tracts
L. O'Donnell, Kubicki M, M. E. Shenton, M. Dreusicke, W. E. L. Grimson, C.-F. Westin
AJNR
2006
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Fornix integrity and hippocampal volume in male schizophrenic patients
N. Kuroki, M. Kubicki, P. G. Nestor D. F. Salisbury, H. J. Park, J. J. Levitt, S. Woolston, M. Frumin, M. Niznikiewicz, C.-F. Westin, S. E. Maier, R. McCarley, M. E. Shenton
Biol Psychiatry
2006
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Weaning from Mechanical Ventilation: a Multimodal Signal Analysis
J. P. Casaseca, M. Martin-Fernandez, C. Alberola-Lopez
IEEE Transactions on Biomedical Engineering
2006
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2005

Visualization of tensor fields using superquadric glyphs
DB. Ennis, G. Kindlmann, I. Rodriguez, PA. Helm, ER. McVeigh
Magnetic Resonance in Medicine
2005

Optics, Mechanics, and Hamilton-Jacobi Skeletons
S. Bouix, K. Siddiqi
Advances in Imaging and Electron Physics
2005
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The application of dti to investigate white matter abnormalities in schizophrenia
M. Kubicki, C.-F. Westin, R. McCarley, M. E. Shenton
Ann NY Acad Sci
2005
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Group-Slicer: a Collaborative Extension of the 3D-Slicer
Federico Simmross-Wattenberg, Noemi Carranza-Herrezuelo, Cristina Palacios-Camarero, Juan Pablo Casaseca de la Higuera, Miguel Angel Martin-Fernandez, Santiago Aja-Fernandez, Juan Ruiz-Alzola, Carl-Fredrik Westin, Carlos Alberola-Lopez
Journal of Biomedical Informatics
2005

Resampling fMRI Time Series
O. Friman, C.-F. Westin
NeuroImage
2005
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DTI and MTR Abnormalities in Schizophrenia: Analysis of White Matter Integrity
M. Kubicki, H.-J. Park, C.-F. Westin, P. Nestor, R. Mulkern, S. E. Maier, M. Niznikiewicz, E. Connor, J. Levitt, M. Frumin, R. Kikinis, F. A. Jolesz, R. McCarley, M. E. Shenton
Neuroimage
2005
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Fronto-Temporal Disconnectivity in Schizotypal Personality Disorder: A Diffusion Tensor Imaging Study
M. Nakamura, R. W. McCarley, M. Kubicki, C. C. Dickey, M. A. Niznikiewicz, M. M. Voglmaier, L. J. Seidman, S. E. Maier, C.-F. Westin, R. Kikinis, M. E. Shenton
Biological Psychiatry
2005
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On Low Order Moments for the Homodyned K Distribution
M. Martin-Fernandez, C. Alberola-Lopez
Ultrasonics
2005
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An Approach for Contour Detection of Human Kidneys from Ultrasound Images using Markov Random Fields and Active Contours
M. Martin-Fernandez, C. Alberola-Lopez
Medical Image Analysis
2005
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Fast Sub-Voxel Re-initialization of the Distance Map for Level Set Methods
K. Krissian, C.-F. Westin
Pattern Recognition Letters
2005

Rigid overlay of volume sonography and MR image data
J. Verhey, and J. Wisser, T. Keller, C.-F. Westin, R. Kikinis
Computerized Medical Imaging and Graphics
2005
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In Vivo Visualization of White Matter Fiber Tracts of Preterm- and Term- Infant Brain with Diffusion Tensor MRI
S.-S. Yoo, H. J. Park, J. S. Soul, H. Mamata, C.-F. Westin, H. Bassan, A. J. Du Plessis, R. L. Robertson, S. A. Ringer, S. E. Maier, J. J. Volpe, G. P. Zientara
Investigative Radiology
2005
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Capturing Intraoperative Deformations: Research Experience At The Surgical Planning Laboratory
S. K. Warfield, S. J. Haker, I.-F. Talos, C. A. Kemper, N. Weisenfeld, A. Mewes, D. Goldberg-Zimring, K. H. Zou, C.-F. Westin, W. M. Wells, C. M. C. Tempany, A. Golby, P. M. Black, F. A. Jolesz, R. Kikinis
Medical Image Analysis
2005
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Identification of translational displacements between N-dimensional data sets using the high order SVD and phase correlation
W. Scott Hoge, Carl-Fredrik Westin
IEEE Transactions on Image Processing
2005
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Kriging Filters for Multidimensional Signal Processing
J. Ruiz-Alzola, C. Alberola-Lopez, C.-F. Westin
Signal Processing
2005
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An in vivo MRI study of prefrontal cortical complexity in first episode psychosis
Laura C. Wiegand, Simon K. Warfield, James J. Levitt, Yoshio Hirayasu, Dean F. Salisbury, S. Heckers, Sylvain Bouix, Daniel Schwartz, Magdalena Spencer, Chandley C. Dickey, Ron Kikinis, Ferenc A. Jolesz, Robert W. McCarley, Martha E. Shenton
American Journal of Psychiatry
2005

Flux Driven Automatic Centerline Extraction
Sylvain Bouix, Kaleem Siddiqi, Allen Tannenbaum
Medical Image Analysis
2005

Hippocampal Shape Analysis using Medial Surfaces
Sylvain Bouix, Jens C. Pruessner, D. Louis Collins, Kaleem Siddiqi
NeuroImage
2005

2004

A Method for the Analysis of the Geometrical Relationship between White Matter Pathology and the Vascular Architecture of the Brain
D. Kozinska, C. Holland, K. Krissian, C.-F. Westin, C. R. G. Guttmann
Neuroimage
2004
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White Matter Hemisphere Asymmetries in Healthy Subjects and in Schizophrenia: A Diffusion Tensor MRI Study
H. J. Park, C.-F. Westin, M. Kubicki, S. E. Maier, M. Niznikiewicz, A. Baer, M. Frumin, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Neuroimage
2004
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Detection and Detrending in Functional MRI Data Analysis
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2004
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Comments on: A Methodology for Evaluation of Boundary Detection Algorithms on Medical Images
C. Alberola-Lopez, M. Martin-Fernandez, J. Ruiz-Alzola
IEEE Transactions on Medical Imaging
2004
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Method for Combining Information from White matter Fiber Tracking and Gray Matter Parcellation
H. J. Park, M. Kubicki, C.-F. Westin, I. F. Talos, A. Brun, S. Pieper, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
American Journal of Neuroradiology
2004
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Biexponential Diffusion Tensor Analysis of Human Brain Diffusion Data
S. E. Maier, S. Vajapeyam, H. Mamata, C.-F. Westin, F. A. Jolesz, R. V. Mulkern
Magnetic Resonance in Medicine
2004
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Comparison of Single-shot Echo-planar and Line Scan Protocols for Diffusion Tensor Imaging
M. Kubicki, S. E. Maier, C.-F. Westin, H. Mamata, H. Ersner-Hershfield, R. San Jose Estepar, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Academic Radiology
2004
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Shape of the Caudate Nucleus and its Cognitive Correlates in Neuroleptic-Naive Schizotypal Personality Disorder
J. J. Levitt, C.-F. Westin, P. G. Nestor, R. San Jose Estepar, C. C. Dickey, M. M. Voglmaier, L. J. Seidman, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Biological Psychiatry
2004
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2003

Subspace identification extension to the phase correlation method
W. Scott Hoge
IEEE Transactions on Medical Imaging
2003
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Adaptive Analysis of fMRI Data
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2003
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Level set-based integration of segmentation and computational fluid dynamics for flow correction in phase contrast angiography.
M. Watanabe, R. Kikinis, C.-F. Westin
Academic Radiology
2003
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Spatial Normalization of Diffusion Tensor MRI Using Multiple Channels
H. J. Park, M. Kubicki, M. E. Shenton, A. Guimond, R. W. McCarley, S. E. Maier, R. Kikinis, F. A. Jolesz, C.-F. Westin
Neuroimage
2003
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A Theoretical Framework to Three-Dimensional Ultrasound Reconstruction from Irregularly-Sample Data
R. San Jose Estepar, M. Martin-Fernandez, P.P. Caballero-Martinez, C. Alberola-Lopez, J. Ruiz-Alzola
Ultrasound in Medicine and Biology
2003
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Cingulate Fasciculus Integrity Disruption in Schizophrenia: A Magnetic Resonance Diffusion Tensor Imaging Study
M. Kubicki, C.-F. Westin, S. E. Maier, H. Mamata, M. Frumin, H. Ernst-Hirshefeld, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Biological Phychiatry
2003
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2002

Detecting Neural Activity in fMRI using Maximum Correlation Modeling
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2002
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Exploratory fMRI Analysis by Autocorrelation Maximization
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2002
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Diffusion Tensor Imaging And Its Application To Neuropsychiatric Disorders
M. Kubicki, C.-F. Westin, S. E. Maier, H. Mamata, M. Frumin, H. Ernst-Hirshefeld, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Harvard Rev of Psychiatry
2002
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Uncinate Fasciculus Findings in Schizophrenia: A Magnetic Resonance Diffusion Tensor Imaging Study
M. Kubicki, C.-F. Westin, S. E. Maier, M. Frumin, P. G. Nestor, D. Salisbury, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
AmJPsych
2002
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High-Resolution Line-Scan Diffusion-Tensor MRI of White Matter Fiber Tract Anatomy
H. Mamata, Y. Mamata, C.-F. Westin, M. E. Shenton, F. A. Jolesz, S. E. Maier
American Journal of NeuroRadiology
2002
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Processing and Visualization of Diffusion Tensor MRI
C.-F. Westin, S. E. Maier, H. Mamata, A. Nabavi, F. A. Jolesz, R. Kikinis
Medical Image Analysis
2002
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Nonrigid Registration of 3D Tensor Medical Data
J. Ruiz-Alzola, C.-F. Westin, S. K. Warfield, C. Alberola, S. E. Maier, R. Kikinis
Medical Image Analysis
2002
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Flux-based Anisotropic Diffusion Applied to Enhancement of 3D Angiograms
K. Krissian
IEEE Transactions on Medical Imaging
2002

Hamilton-Jacobi Skeletons
Kaleem Siddiqi, Sylvain Bouix, Allen Tannenbaum, Steven W. Zucker
International Journal of Computer Vision
2002

2001

An Integrated Visualization System for Surgical Planning and Guidance Using Image Fusion and an Open MR
David T. Gering MS, Arya Nabavi MD, Ron Kikinis, Lauren J. O'Donnell BS, W. Eric L. Grimson PhD, Ferenc Peter M. Black MD, William M. Wells III. PhD
Journal od Magentic Resonance Imaging
2001
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Detection of neural activity in functional MRI using Canonical Correlation Analysis
O. Friman, J. Carlsson, P. Lundberg, M. Borga, H. Knutsson
Magnetic Resonance in Medicine
2001
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Detection of Landmarks in Multidimensional Tensor Data
J. Ruiz-Alzola, R. Kikinis, C.-F. Westin
Signal Processing
2001
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CURVES: Curve Evolution for Vessel Segmentation
L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, R. Keriven, R. Kikinis, A. Nabavi, C.-F. Westin
Medical Image Analysis
2001

Three-dimensional Adaptive Filtering in Magnetic Resonance Angiography
C.-F. Westin, L. Wigström, T. Loock, L. Sjökvist, R. Kikinis, H. Knutsson
Journal of Magnetic Resonance Imaging
2001
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Serial Intraoperative MR Imaging of Brain Shift
A. Nabavi, P. Mc. L. Black, D. T. Gering, C.-F. Westin, V. Metha, R. S. Pergolizzi, Jr., M. Ferrant, S. K. Warfield, N. Hata, R. B. Schwarts, W. M. Wells, R. Kikinis, F. A. Jolesz
Neurosurgery
2001
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2000

Sensitivity Profiles from an Array of Coils for Encoding and Reconstruction in Parallel (SPACE RIP)
W. E. Kyriakos, L. P. Panych, D. F. Kacher, C.-F. Westin, S. M. Bao, R. V. Mulkern, F. A. Jolesz
Magnetic Resonance in Medicine
2000

Intraoperative MRI for the resection of intracranial vascular malformation
A. Nabavi, R. S. Pergolizzi Jr RS, C. Martin, R. B. Schwartz, R. M. Friedlander, D. Kacher, C.-F. Westin, R. Kikinis, E. Alexander III, P. Mc. L. Black, F. A. Jolesz, P. E. Stieg
Stroke
2000

Tissue Classification Based on 3D Local Intensity Structure for Volume Rendering
Y. Sato, C.-F. Westin, A. Bhalerao, S. Nakajima, N. Shiraga, S. Tamura, R. Kikinis
IEEE Trans on Visualization and Computer Graphics
2000
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Affine Adaptive Filtering of CT Data
C.-F. Westin, J. Richolt, V. Moharir, R. Kikinis
Medical Image Analysis
2000
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1999

Multi-component apparent diffusion coefficients in human brain
R. V. Mulkern, H. Gudbjartsson, C.-F. Westin, H. P. Zengigonul, W. Gartner, C. R. G.Guttmann, R. Robertson, W. Kyriakos, R. Schwartz, D. Holtzman, F. A. Jolesz, S. E. Maier
NMR Biomedicine
1999

Real Time Video Scene Detection and Classification
John M. Gauch, Susan Gauch, Sylvain Bouix, Xiaolan Zhu
Information processing and Management
1999

1998

Magnetic Resonance Imaging Shows Orientation and Asymmetry of White Matter Tracts
S. Peled, H. Gudbjartsson, C.-F. Westin, R. Kikinis, F. A. Jolesz
Brain Research
1998
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