2008

Kindlmann G, Whalen S, Suarez R, Golby A, Westin CF. Quantification of white matter fiber orientation at tumor margins with diffusion tensor invariant gradients. In Proceedings of the ISMRM Annual Meeting (ISMRM'08). 2008;.

San Jose Estepar R, Washko GG, Silverman EK, Reilly JJ, Kikinis R, Westin CF. Airway inspector: An open source application for lung morphometry. In First International Workshop on Pulmonary Image Processing. New York City, USA, 2008;293-302. Available on-line: www.lulu.com/content/3507981.

Maddah M, Zöllei L, Grimson WEL, Westin CF, Wells WM. A mathematical framework for incorporating anatomical knowledge in DT-MRI analysis. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, ISBI 2008. Paris, France, 2008;105-108.

Maddah M, Kubicki M, Wells W, Westin CF, Shenton M, Grimson W. Findings in schizophrenia by tract-oriented DT-MRI analysis. In Eleventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07). 2008;917-924.

Rathi Y, Michailovich O, Bouix S, Shenton ME. Directional functions for orientation distribution estimation. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, ISBI 2008. Paris, France, 2008;.

Michailovich O, Rathi Y. On approximation of orientation distributions by means of spherical ridgelets. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, ISBI 2008. Paris, France, 2008;.

Rathi Y, Dambreville S, Neithammer M, Malcolm J, Levitt J, Shenton ME, Tannenbaum A. Segmenting images analytically in shape space. In Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, ISBI 2008. Paris, France, 2008;.

2007

Maddah M, Wells WM, Warfield S, Westin CF, Grimson WEL. A spatial model of white matter fiber tracts. In Proceedings of the ISMRM Annual Meeting (ISMRM'07). 2007;1.

Lemmond ME, O'Donnell LJ, Whalen S, Golby AJ. Characterizing diffusion along white matter tracts affected by primary brain tumors. In Human Brain Mapping 2007. 2007;.

Suarez-Santana E, Nebot R, Westin CF, Ruiz-Alzola J. Fast blockmatching registration with entropy-based similarity. In Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), Lecture Notes in Computer Science. Brisbane, Australia, 2007;178-185.

O'Donnell LJ, Westin CF, Golby AJ. Tract-based morphometry. In Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), volume 4792 of Lecture Notes in Computer Science. Brisbane, Australia, 2007;161-168.

Ziyan U, Sabuncu MR, O'Donnell LJ, Westin CF. Nonlinear registration of diffusion mr images based on fiber bundles. In Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), volume 4791 of Lecture Notes in Computer Science. Brisbane, Australia, 2007;351-358.

Bhalerao A, Westin CF. Hyperspherical von mises-fisher mixture (hvmf) modelling of high angular resolution diffusion mri. In Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), volume 4791 of Lecture Notes in Computer Science. Brisbane, Australia, 2007;236-243.

Niethammer M, Bouix S, Aja-Fernandez S, Westin CF, Shenton ME. Outlier rejection for diffusion weigthed imaging. In Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), volume 4791 of Lecture Notes in Computer Science. Brisbane, Australia, 2007;161-168.

Aja-Fernandez S, Alberola-Lopez C, Westin CF. Signal lmmse estimation from multiple samples in mri and dt-mri. In Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), volume 4792 of Lecture Notes in Computer Science. Brisbane, Australia, 2007;368-375.

Bergmann O, Kindlmann G, Peled S, Westin CF. Two-tensor fiber tractography. In Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on Biomedical Imaging, ISBI 2007. Arlington, VA, 2007;796-799.

Ziyan U, Sabuncu MR, Grimson WEL, Westin CF. A robust algorithm for fiber-bundle atlas construction. In Mathematical Methods in Biomedical Image Analysis (MMBIA 2007): 2007 IEEE Workshop, ICCV 2007 workshop. Rio de Janeiro, Brazil, 2007;.

Maddah M, III WMW, Warfield SK, Westin CF, Grimson WEL. Probabilistic clustering and quantitative analysis of white matter fiber tracts. In Information Processing in Medical Imaging: 20th International Conference (IPMI 2007), volume 20 of Inf Process Med Imaging. Kerkrade, The Netherlands, 2007;372-383.

Kindlmann G, Estepar RSJ, Niethammer M, Haker S, Westin CF. Geodesic-loxodromes for diffusion tensor interpolation and difference measurement. In Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'07), Lecture Notes in Computer Science 4791. Brisbane, Australia, 2007;1-9.

de Luis-Garcia R, Aja-Fernandez S, Cardenez-Almeida R, Martin-Fernandez M, Alberola-Lopez C. Analysis of ultrasound images based on local statistics. application to the diagnosis of develpmental dysplasia of the hip. In IEEE International Ultrasonics Symposium. New York, NY, USA, 2007;2531-2534.

Martin-Fernandez M, Cardenes R, Alberola-Lopez C. Parameter estimation of the homodyned k distribution based on signal to noise ratio. In IEEE International Ultrasonics Symposium. New York, NY, USA, 2007;158-161.

Cardenes R, Tristan A, Cordero-Grande L, Munoz-Moreno E, Martin-Fernandez M. UsimagTool: an interactive tool for ultrasound image processing. In IEEE Seventh International Symposium on BioInformatics and BioEngineering. Boston, MA, USA, 2007;.

Aja-Fernandez S, Martin-Fernandez M, Alberola-Lopez C. Tissue identification in ultrasound images using rayleigh local parameter estimation. In IEEE Seventh International Symposium on BioInformatics and BioEngineering. Boston, MA, USA, 2007;1129-1133.

San-Jose-Revuelta L, Martin-Fernandez M, Alberola-Lopez C. Neural network-assisted fiber tracking of synthetic and white matter DT-MR images. In Lecture Notes in Engineering and Computer Science, World Congress on Engineering. London, UK, 2007;618-623.

San-Jose-Revuelta L, Martin-Fernandez M, Alberola-Lopez C. A new proposal for 3D fiber tracking in synthetic diffusion tensor magnetic resonance images. In IEEE International Symposium on Signal Processing and its Applications. Sharjah, United Arab Emirates, 2007;.

de-la Viuda-Garcia P, de-la Higuera PC, Cordero-Grande L, Vegas-Sanchez-Ferrero G, Martin-Fernandez M, Alberola-Lopez C. Partial volume effect modelling in cardiac mri by means of mixture of gaussians. In Fiveteenth Annual Symposium of the Spanish Biomedical Engineering Society. Cartagena, Spain, 2007;145-148. In Spanish.

2006

O'Donnell L, Westin CF. High-dimensional white matter atlas generation and group analysis. In Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Lecture Notes in Computer Science 4191. Copenhagen, Denmark, 2006;243-251.

Dauguet J, Peled S, Berezovskii V, Delzescaux T, Warfield SK, Born R, Westin CF. 3D histological reconstruction of fiber tracts and direct comparison with diffusion tensor MRI tractography. In Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Lecture Notes in Computer Science 4190. Copenhagen, Denmark, 2006;109-116.

Farnebäck G, Westin CF. Affine and deformable registration based on polynomial expansion. In Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Lecture Notes in Computer Science 4191. Copenhagen, Denmark, 2006;857-864.

Ziyan U, Tuch D, Westin CF. Segmentation of thalamic nuclei from DTI using spectral clustering. In Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Lecture Notes in Computer Science 4191. Copenhagen, Denmark, 2006;807-814.

Bergmann Ø, Kindlmann G, Lundervold A, Westin CF. Diffusion k-tensor estimation from q-ball imaging using discretized principal axes. In Nineth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Lecture Notes in Computer Science 4191. Copenhagen, Denmark, 2006;268-275.

Niethammer M, Bouix S, Westin CF, Shenton ME. Fiber bundle estimation and parameterization. In Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Lecture Notes in Computer Science 4191. Copenhagen, Denmark, 2006;252-259.

San Jose Estepar R, Washko GG, Silverman EK, Reilly JJ, Kikinis R, Westin CF. Accurate airway wall estimation using phase congruency. In Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Lecture Notes in Computer Science 4191. Copenhagen, Denmark, 2006;125-134.

San Jose Estepar R, Stylopoulos N, Ellis RE, Samset E, Westin CF, Thompson C, Vosburgh K. Towards scarless surgery: An endoscopic-ultrasound navigation system for transgastric access procedures. In Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Lecture Notes in Computer Science 4190. Copenhagen, Denmark, 2006;445-453.

Niethammer M, San Jose Estepar R, Bouix S, Shenton M, Westin CF. On diffusion tensor estimation. In 28th IEEE EMBS. New York City, NY, USA, 2006;2622-2625.

San-Jose-Revuelta L, Martin-Fernandez M, Alberola-Lopez C. A new method for fiber tractography in diffusion tensor magnetic resonance images. In 2006 IEEE International Conference on Signal and Image Processing - ICSIP 2006, volume 1. Hubli, India, 2006;380-385.

Martin-Fernandez M, Munoz-Moreno E, Alberola-Lopez C. A speckle removal filter based on an anisotropic wiener filter and the rice distribution. In 2006 IEEE International Ultrasonics Symposium. Vancouver, Canada, 2006;1694-1697.

Brun A, Martin-Fernandez M, Acar B, Munoz-Moreno E, Cammoun L, Sigfridsson A, Sosa D, Svensson B, Herberthson M, Knutsson H. SIMILAR tensor arrays -a framework for storage of tensor data. In SIMILAR NoE Tensor Workshop. Las Palmas de Gran Canaria, Spain, 2006;.

Munoz-Moreno E, Suarez-Santana E, Martin-Fernandez M. Registration of dti. In SIMILAR NoE Tensor Workshop. Las Palmas de Gran Canaria, Spain, 2006;.

Merino-Caviedes S, Lopez-Ibanez D, Garcia-Avedillo J, Martin-Fernandez M. User interfaces to interact with tensor fields. a state-of-the-art analysis. In SIMILAR NoE Tensor Workshop. Las Palmas de Gran Canaria, Spain, 2006;.

Cordero-Grande L, de-la Higuera PC, Martin-Fernandez M, Alberola-Lopez C. Endocardium and epicardium contour modeling based on markov random fields and active contours. In 28th Annual International Conference of IEEE Engineering in Medicine and Biology Society, EMBC-2006. New York City, NY, USA, 2006;928-931.

San Jose Estepar R, Kubicki M, Shenton M, Westin CF. A kernel-based approach for user-guided fiber bundling using diffusion tensor data. In 28th IEEE EMBS. New York City, NY, USA, 2006;2626-2629.

Aja-Fernandez S, San Jose Estepar R, Alberola Lopez C, Westin CF. Image quality assessment based on local variance. In 28th IEEE EMBS. New York City, NY, USA, 2006;4815-4818.

O'Donnell L, Westin CF. A high-dimensional fiber tract atlas. In Proceedings of the ISMRM Annual Meeting (ISMRM'06). Seattle, USA, 2006;1.

2005

Pichon E, Westin CF, Tannenbaum A. A Hamilton-Jacobi-Bellman approach to high angular resolution diffusion tractography. In Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Lecture Notes in Computer Science 3749. Palm Springs, CA, USA, 2005;180-187.

Martin-Fernandez M, Bouix S, Ungar L, McCarley RW, Shenton ME. Two methods for validating brain tissue classifiers. In Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Lecture Notes in Computer Science 3749. Palm Springs, CA, USA, 2005;515-522.

O'Donnell L, Westin CF. White matter tract clustering and correspondence in populations. In Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Lecture Notes in Computer Science 3749. Palm Springs, CA, USA, 2005;140-147.

Luboz V, Wu X, Krissian K, Westin CF, Kikinis R, Cotin S, Dawson S. A segmentation and reconstruction technique for 3d vascular structures. In Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Lecture Notes in Computer Science 3749. Palm Springs, CA, USA, 2005;43-50.

San Jose Estepar R, Haker S, Westin CF. Riemannian mean curvature flow. In Lecture Notes in Computer Science: ISVC05, volume 3804 of Lecture Notes in Computer Science. 2005;613-620.

de Luis Garcia R, San Jose Estepar R, Alberola-Lopez C. Pull-push level sets: a new term to encode prior knowledge for the segmentation of teeth images. In Medical Imaging 2005: Image Processing, volume 5747 of Proceedings of SPIE. 2005;598-605.

Brun A, Westin CF, Haker S, Knutsson H. A tensor-like representation for averaging, filtering and interpolation of 3-d object orientation data. In Proceedings of the IEEE-ICIP. Genoa, Italy, 2005;1-104.

Brun A, Westin CF, Herberthson M, Knutsson H. Fast manifold learning based on riemannian normal coordinates. In Proceedings of the SCIA;05. Joensuu, Finland, 2005;920-929.

Friman O, Morocz I, Westin CF. Examining the whiteness of fMRI noise. In Proceedings of the ISMRM Annual Meeting (ISMRM'05). Miami, USA, 2005;.

Krissian K, Vosburgh K, Kikinis R, Westin CF. Speckle-constrained anisotropic diffusion for ultrasound images. In Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'05). San Diego CA, USA, 2005;547 - 552.

Bouix S, Martin-Fernandez M, Ungar L, Shenton M, McCarley R. Automatic evaluation of brain MR segmentation techniques by level of agreement. In 11th Annual Meeting of the Organization for the Human Brain Mapping. Toronto, ON, Canada, 2005;1-3.

Martin-Fernandez MA, Munoz-Moreno E, Martin-Fernandez M, Alberola-Lopez C. Articulated registration: Elastic registration based on a wire-model. In JM Fitzpatrick, JM Reinhardt, eds., Medical Imaging 2005: Image Processing. San Diego, CA, USA: SPIE Press, 2005;182-191. Proc. of the SPIE 5747.

2004

O'Donnell L, Grimson WEL, Westin CF. Interface detection in DTMRI. In Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Lecture Notes in Computer Science. Rennes - Saint Malo, France, 2004;360-367.

Castano-Moraga CA, Rodrigues-Florido MA, Alvarez L, Westin CF, Ruiz-Alzola J. Anisotropic interpolation of DT-MRI data. In Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Lecture Notes in Computer Science. Rennes - Saint Malo, France, 2004;343-350.

San Jose Estepar R, Brun A, Westin CF. Robust generalized total least squares iterative closest point registration. In Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Lecture Notes in Computer Science. Rennes - Saint Malo, France, 2004;234-241.

Friman O, Westin CF. Bias in resampling-based thresholding of statistical maps in fMRI. In Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Lecture Notes in Computer Science. Rennes - Saint Malo, France, 2004;687-694.

Park HJ, Shenton ME, Westin CF. An analysis tool for quantification of diffusion tensor imaging. In Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Lecture Notes in Computer Science. Rennes - Saint Malo, France, 2004;1040-1041.

Martin-Fernandez M, Westin CF, Alberola-Lopez C. 3d bayesian regularization of diffusion tensor MRI using multivariate gaussian markov random fields. In Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Lecture Notes in Computer Science. Rennes - Saint Malo, France, 2004;351-359.

Friman O. Subspace models for functional MRI data analysis. In Proceedings of 2004 IEEE International Symposium on Biomedical Imaging. Arlington, VA, USA, 2004;1-4. Invited Paper.

Brun A, Westin CF, Haker S, Knutsson H. A novel approach to averaging, filtering and interpolation of 3-D object orientation data. In Proceedings of the Swedish Symposium on Image Analysis. Uppsala, Sweden, 2004;5-8. Available on request.

Pohl K, Grimson WEL, Bouix S, Kikinis R. Anatomical guided segmentation with non-stationary tissue class distributions in an expectation-maximization framework. In ISBI. Arlington, VA, USA: IEEE, 2004;81-84.

Haidar H, Bouix S, Levitt J, McCarley RW, Shenton ME, Soul JS. An elliptic pde approach for shape characterization. In EMBS. san Francisco, CA, USA: IEEE, 2004;.

Haidar H, Bouix S, Levitt J, Dickey CC, McCarley RW, Shenton ME, Soul JS. Characterizing the shape of anatomical structures with poisson's equation. In MICCAI, volume 3216 of Lecture Notes in Computer Science. Saint Malo, France: Springer, 2004;266-273.

Bouix S, Ungar L, Dickey CC, McCarley RW, Shenton ME. Evaluating automatic brain tissue classifiers. In MICCAI, volume 3216 of Lecture Notes in Computer Science. Saint Malo, France: Springer, 2004;1038-1039.

2003

San Jose Estepar R, Martin-Fernandez M, Alberola-Lopez C, Ellsmere J, Kikinis R, Westin CF. Freehand ultrasound reconstruction based on roi prior modeling and normalized convolution. In RE Ellis, TM Peters, eds., Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Lecture Notes in Computer Science 2879. Montreal, Canada: Springer Verlag, 2003;382-390.

Talos IF, O'Donnell L, Westin CF, Warfield SK, Wells WM, Yoo SS, Panych L, Golby A, Mamata H, Maier SE, Ratiu P, Guttmann CG, Black PML, Jolesz FA, Kikinis R. Diffusion tensor and functional MRI fusion with anatomical mri for image guided neurosurgery. In Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03). Montreal, Canada, 2003;407-415.

Martin-Fernandez M, Alberola-Lopez C, Ruiz-Alzola J, Westin CF. Regularization of diffusion tensor maps using a non-gaussian markov random field approach. In RE Ellis, TM Peters, eds., Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Lecture Notes in Computer Science 2879. Montreal, Canada: Springer Verlag, 2003;92-100.

Bhalerao A, Westin CF. Tensor splats: Visualising tensor fields by texture mapped volume rendering. In Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03). Montreal, Canada, 2003;294-901.

Ruiz-Alzola J, Suarez E, Alberola-Lopez C, Warfield SK, Westin CF. Geostatistical medial image registration. In Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03). Montreal, Canada, 2003;894-901.

Hoge WS, Mitsouras D, Rybicki FR, Mulkern RV, Westin CF. Registration of multi-dimensional image data via sub-pixel resolution phase correlation. In IEEE Intl. Conf. on Image Processing (ICIP-03). Barcelona, Spain, 2003;707-710.

de Luis R, Martin-Fernandez M, Martin M, Alberola-Lopez C. A fully automatic algorithm for contour detection of bones in hand radiographs using active contours. In Proceedings of the IEEE International Conference on Image Processing (ICIP'03), volume III. Barcelona, Spain, 2003;421-424.

Krissian K, Ellsmere J, Vosburgh K, Kikinis R, Westin CF. Multiscale segmentation of the aorta in 3d ultrasound images. In 25th Annual Int. Conf. of the IEEE Engineering in Medicine and Biology Society (EMBS). Cancun, Mexico, 2003;638-641.

de Luis R, Martin-Fernandez M, Martin M, Alberola-Lopez C. A model-based algorithm for the automatic segmentation of metacarpals in hand-wrist radiographs using active contours. In Proceedings of the Third Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery (CAOS'03). Marbella, Spain, 2003;80-81.

Sigfridsson A, San Jose Estepar R, Wigstrom L, Alberola-Lopez C, Westin CF. Diffusion tensor visualization using random field correlation and volume rendering. In RM Diaz, AQ Arencibia, eds., Proc. of th 9th International Workshop on Computer Aided Systems Theory. Las Palmas de Gran Canaria, Spain: Universidad de Las Palmas de Gran Canaria, 2003;41-45.

San Jose Estepar R, Alberola-Lopez C, Ruiz-Alzola J, Kikinis R, Westin CF. Shape alignment based on phase spectrum and ica. In RM Diaz, AQ Arencibia, eds., Computer Aided Systems Theory (EUROCAST'03). Las Palmas de Gran Canaria, Spain: Universidad de Las Palmas de Gran Canaria, 2003;63-66.

Krissian K, Westin CF. Fast and accurate redistancing for level set methods. In RM Diaz, AQ Arencibia, eds., Computer Aided Systems Theory (EUROCAST'03). Las Palmas de Gran Canaria, Spain: Universidad de Las Palmas de Gran Canaria, 2003;48-51.

Westin CF, Knutsson H. Tensor field regularization using normalized convolution. In RM Diaz, AQ Arencibia, eds., Computer Aided Systems Theory (EUROCAST'03), LNCS 2809. Las Palmas de Gran Canaria, Spain: Springer Verlag, 2003;564-572.

Rodriguez-Florido MA, Cardenes R, Westin CF, Alberola-Lopez C, Ruiz-Alzola J. Anisotropic regularization of posterior probability maps using vector space projections. In RM Diaz, AQ Arencibia, eds., Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809. Las Palmas de Gran Canaria, Spain: Springer Verlag, 2003;597-606.

Suarez E, Santana JA, Rovaris E, Westin CF, Ruiz-Alzola J. Fast entropy-based nonrigid registration. In RM Diaz, AQ Arencibia, eds., Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809. Las Palmas de Gran Canaria, Spain: Springer Verlag, 2003;607-615.

Martin-Fernandez M, San Jose Estepar R, Westin CF, Alberola-Lopez C. A novel gauss-markov random field approach for regularization of diffusion tensor maps. In R Moreno-Diaz, F Pichler, eds., Ninth International Conference on Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809. Las Palmas de Gran Canaria, Spain: Springer Verlag, 2003;506-517.

Martin-Fernandez M, San Jose Estepar R, Westin CF, Alberola-Lopez C. A novel gauss-markov random field approach for regularization of diffusion tensor maps. In Abstracts of the Ninth International Conference on Computer Aided Systems Theory (EUROCAST'03). Las Palmas de Gran Canaria, Spain, 2003;29-32.

Brun A, Park HJ, Knutsson H, Westin CF. Coloring of DT-MRI fiber traces using laplacian eigenmaps. In RM Diaz, AQ Arencibia, eds., Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809. Las Palmas de Gran Canaria, Spain: Springer Verlag, 2003;564-572.

Martin M, Martin-Fernandez M, Alberola-Lopez C. Automatic bone age assessment: A registration approach. In M Sonka, JM Fitzpatrick, eds., Medical Imaging 2003: Image Processing. San Diego, CA, USA: SPIE Press, 2003;1765-1776. Proceedings of the SPIE 5032.

Warfield SK, Talos F, Kemper C, O'Donnell L, Westin CF, Wells WM, Black PML, Jolesz FA, Kikinis R. Capturing brain deformation. In Surgery Simulation and Soft Tissue Modeling, International Symposium, IS4TM 2003, LNCS 2673. Juan-Les-Pins, France: Springer Verlag, 2003;203-217.

Bouix S, Siddiqi K, Tannenbaum A. Flux driven fly throughs. In Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'03). Madison, WI, USA: IEEE Computer Society, 2003;449-454.

2002

Friman O, Borga M, Lundberg P, Knutsson H. Hierarchical temporal blind source separation of fMRI data. In Proceedings of the ISMRM Annual Meeting (ISMRM'02). Honolulu, Hawaii, 2002;1-2.

Maier SE, Mamata H, Westin CF, Mulkern RV. Magnetic resonance diffusion tensor imaging - a tool for non-invasive exploration of neuroanatomy. In International Symposium for Young Researchers on 'Modeling and their Applications 2002' (IA'02). Osaka, Japan, 2002;45-52.

Martin-Fernandez M, Alberola-Lopez C. A bayesian approach to in vivo kidney ultrasound contour detection. In T Dohi, R Kikinis, eds., Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'02), Lecture Notes in Computer Science 2489. Tokyo, Japan: Springer Verlag, 2002;397-404.

Suarez E, Westin CF, Rovaris E, Ruiz-Alzola J. Nonridgid registration using regularized matching weighted by local structure. In Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'02). Tokyo, Japan, 2002;581-589. Best paper award.

Nain D, Haker S, Grimson WEL, Jr EC, Wells WM, Ji H, Kikinis R, Westin CF. Intra-patient prone to supine colon registration for synchronized colonoscopy. In Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'02). Tokyo, Japan, 2002;573-580.

Watanabe M, Kikinis R, Westin CF. Level set based integration of segmentation and computational fluid dynamics for flow correction in phase contrast angiography. In Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'02). Tokyo, Japan, 2002;405-412.

O'Donnell L, Haker S, Westin CF. New approaches to estimation of white matter connectivity in diffusion tensor MRI: Elliptic pdes and geodesics in a tensor-warped space. In Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'02). Tokyo, Japan, 2002;459-466.

Björnemo M, Brun A, Kikinis R, Westin CF. Regularized stochastic white matter tractography using diffusion tensor MRI. In Fifth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'02). Tokyo, Japan, 2002;435-442.

Guimond A, Guttmann CRG, Warfield SK, Westin CF. Deformable registration of DT-MRI data based on transformation invariant tensor characteristics. In Proceedings of the IEEE International Symposium on Biomedical Imaging (ISBI'02). Washington (DC), USA, 2002;1-4.

Guimond A, Westin CF, Panych LP, Guttmann CRG. Deformable registration of DT-MRI data based on invariant tensor characteristics. In Proceedings of the Eighth International Conference on Functional Mapping of the Human Brain (HBM'02). Sendai, Japan, 2002;1-4.

Brun A, Björnemo M, Kikinis R, Westin CF. White matter tractography using sequential importance sampling. In Proceedings of the ISMRM Annual Meeting (ISMRM'02). Honolulu, Hawaii, 2002;1.

Zhu L, Bouix S, Haker S, Siddiqi K, Tannenbaum A. Angle-preserving mappings for the visualization of multi-branched vessels. In ICIP. Rochester, NY, 2002;945-948.

2001

Martin-Fernandez M, San Jose Estepar R, Alberola-Lopez C. Maximum likelihood contour estimation using beta-statistics in ultrasound images. In Proceedings of the IEEE-EURASIP Image and Signal Processing and Analysis (ISPA'01). Pula, Croatia, 2001;207-212.

Suarez E, Cardenes R, Alberola C, Westin CF, Ruiz-Alzola J. General approach to nonrigid registration: Decoupled optimization. In 23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC '01). 2001;2422-2425.

Rodrigues-Florido MA, Ruiz-Alzola J, Westin CF. Artifact reduction in sinc interpolation using adaptive filtering. In Proc. IEEE International Conf on Image Processing. Thessaloniki, Greece, 2001;884-887.

Haber I, Kikinis R, Westin CF. Phase-driven finite element model for spatio-temporal tracking in tagged cardiac MRI. In W Niessen, ed., Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01). Utrecht, Netherlands: Springer Verlag, 2001;1332-1335.

O'Donnell L, Westin CF, Grimson WEL, Ruiz-Alzola J, Shenton ME, Kikinis R. Phase-based user-steered image segmentation. In W Niessen, ed., Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01). Utrecht, Netherlands: Springer Verlag, 2001;1022-1030.

Rodrigues-Florido MA, Krissian K, Ruiz-Alzola J, Westin CF. Comparison of two restoration techniques in the context of 3d medical imaging. In W Niessen, ed., Fourth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'01). Utrecht, Netherlands: Springer Verlag, 2001;1031-1039.

Bouix S, Pruessner JC, Collins DL, Siddiqi K. Hippocampal shape analysis using medial surfaces. In MICCAI, volume 2208 of Lecture Notes in Computer Science. Utrecht, The Netherlands: Springer, 2001;33-40.

2000

Kubicki MR, Westin CF, McCarley RW, Maier SE, Kikinis R, Shenton ME. Cingulum bundle in schizophrenics: Diffusion tensor study. In Supplement to Radiology, volume 217. 2000;296.

Ruiz-Alzola J, Westin CF, Warfield SK, Nabavi A, Kikinis R. Nonrigid registration of 3d scalar vector and tensor medical data. In AM DiGioia, S Delp, eds., Proceedings of MICCAI 2000, Third International Conference on Medical Image Computing and Computer-Assisted Intervention. Pittsburgh, 2000;541-550.

Alberola-Lopez C, Cardenes R, Martin-Fernandez M, Martin M, Rodriguez-Florido MA, Ruiz-Alzola J. disnei: A collaborative environment for medical images analysis and visualization. In AA Di-Gioia, S Delp, eds., Third International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'00), Lecture Notes in Computer Science 1935. Pittsburgh, PA, USA: Springer Verlag, 2000;814-823.

Westin CF, Lorigo LM, Faugeras OD, Grimson WEL, Dawson S, Norbash A, Kikinis R. Segmentation by adaptive geodesic active contours. In AM DiGioia, S Delp, eds., Proceedings of MICCAI 2000, Third International Conference on Medical Image Computing and Computer-Assisted Intervention. Pittsburgh, 2000;266-275.

Martin-Fernandez M, Alberola-Lopez C, Guerrero D, Ruiz-Alzola J. A coding technique with progressive reconstruction based on vq and entropy coding applied to medical images. In E Kramer, ed., Applications of Digital Image Processing XXIII, Proceedings of the SPIE 4115. San Diego, CA, USA: SPIE Press, 2000;171-181.

Martin-Fernandez M, Rodriguez E, Tejada D, Alberola-Lopez C, Ruiz-Alzola J. Energy functions for the segmentation of ultrasound volume data using active rays. In Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'00). Istanbul, Turkey, 2000;2274-2277.

Grimson WEL, Leventon M, Lorigo LM, Kapur T, Faugeras OD, Kikinis R, Keriven R, Nabavi A, Westin CF. Image guided surgery. In Fourth International Workshop on Algorithmic Foundations of Robotics (WAFR). Hanover, NH, USA, 2000;443-450. Invited Paper.

Lorigo LM, Faugeras OD, Grimson WEL, Keriven R, Kikinis R, Westin CF. Co-dimension 2 geodesic active contours. In Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'02). South Carolina, USA, 2000;1444-1451.

Bouix S, Dimitrov P, Siddiqi K. Physics-based skeletons. In Vision Interface. Montreal, Canada, 2000;23-30.

Bouix S, Siddiqi K. Divergence-based medial surfaces. In ECCV, volume 1842 of Lecture Notes in Computer Science. Dublin, Ireland: Springer, 2000;603-618.

1999

Westin CF, Maier SE, Khidhir B, Everett P, Jolesz FA, Kikinis R. Image processing for diffusion tensor magnetic resonance imaging. In Medical Image Computing and Computer-Assisted Intervention, Lecture Notes in Computer Science. 1999;441-452.

Warfield SK, Westin CF, Guttmann CRG, Albert M, Jolesz FA, Kikinis R. Fractional segmentation of white matter. In Proceedings of MICCAI'99, Second International Conference on Medical Image Computing and Computer-Assisted Intervention, 1999, Lecture Notes in Computer Science. 1999;62-71.

Lorigo LM, Faugeras OD, Grimson WEL, Keriven R, Kikinis R, Westin CF. Co-dimension 2 geodesic active contours for mra segmentation. In Int'l Conf. Information Processing in Medical Imaging (IPMI'99). Visegr\'ad, Hungary, 1999;126-133. Best Paper Award.

Siddiqi K, Bouix S, Tannenbaum A, Zucker SW. The hamilton-jacobi skeleton. In ICCV. Corfu, Greece, 1999;828-834.

1998

Kikinis R, Warfield SK, Westin CF. High performance computing in medical image analysis at the surgical planning laboratory. In High Performance Computing Asia'98. Singapore, 1998;290-297.

Kettenbach J, Schreyer AG, Okuda S, Sweeney MD, Eisenberg S, Westin CF, Jacobson F, Kikinis R, KenKnight BH, Jolesz FA. 3D modelling of the chest in patients with implanted cardiac defibrillator for further bioelectrical simulation. In Proceedings of Computer Assisted Radiology. Tokyom Japan: Elsevier BV, 1998;194-198.

1997

Sato Y, Westin CF, Bhalerao A, Nakajima S, Shiraga N, Yoshida S, Kikinis R. Tissue classification based on 3D local intensity structures for volume rendering. In Proc. JAMIT Frontier '97. Suita, Japan, 1997;167-172.

Westin CF, Bhalerao A, Knutsson H, Kikinis R. Using local 3D structure for segmentation of bone from computer tomography images. In IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR '97). Puerto Rico, 1997;794-800.

Westin CF, Peled S, Gudbjartsson H, Kikinis R, Jolesz FA. Geometrical diffusion measures for MRI from tensor basis analysis. In ISMRM '97. Vancouver Canada, 1997;1742.

Bhalerao A, Westin CF, Kikinis R. Unwrapping phase in 3D MR phase contrast angiograms. In 1st Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine and Medical Robotics and Computer-Assisted Surgery, CVRMED/MRCAS '97, Lecture Notes in Computer Science. Grenoble France: Springer-Verlag, 1997;193-202.

1996

1995

Karlholm J, Westelius CJ, Westin CF, Knutsson H. Object tracking based on the orientation tensor concept. In Proceedings of the 9th Scandinavian Conference on Image Analysis. Uppsala, Sweden: SCIA, 1995;.

1994

Westin CF, Knutsson H. Processing incomplete and uncertain data using subspace methods. In Proceedings of 12th International Conference on Pattern Recognition. Jerusalem,Israel: IAPR, 1994;171-173.

Westin CF, Knutsson H. Estimation of motion vector fields using tensor field filtering. In Proceedings of IEEE International Conference on Image Processing (ICIP'94). Austin, Texas, 1994;237-242.

Westin CF, Nordberg K, Knutsson H. On the equivalence of normalized convolution and normalized differential convolution. In Proceedings of IEEE International Conference on Acoustics, Speech, & Signal Processing (ICASSP'94). Adelaide, Australia, 1994;457-460.

Westin CF, Knutsson H. Processing incomplete and uncertain data using subspace methods. In Proceedings of 12th International Conference on Pattern Recognition (ICPR'94). Jerusalem, Israel, 1994;171-173.

1993

Knutsson H, Westin CF. Normalized convolution: A technique for filtering incomplete and uncertain data. In Proceedings of the 8th Scandinavian Conference on Image Analysis. SCIA, Tromsö, Norway: NOBIM, Norwegian Society for Image Processing and Pattern Recognition, 1993;Report LiTH-ISY-I-1528.

1992

Westin CF, Knutsson H. The Möbius strip parameterization for line extraction. In G Sandini, ed., In Proceedings of Second European Conference on Computer Vision ECCV'92. Santa Margherita Ligure, Italy: Springer-Verlag, 1992;33-38. LNCS-Series Vol. 588.

1991

1989