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2008
References only

A Mathematical Framework for Incorporating Anatomical Knowledge in DT-MRI analysis
Mahnaz Maddah, Lilla Zllei, W. Eric L. Grimson, Carl-Fredrik Westin, William M. Wells
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, Paris, France
2008

Directional Functions for Orientation Distribution Estimation
Yogesh Rathi, Oleg Michailovich, Sylvain Bouix, Martha E. Shenton
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, Paris, France
2008

On approximation of orientation distributions by means of spherical ridgelets
Oleg Michailovich, Yogesh Rathi
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, Paris, France
2008

Segmenting Images Analytically in Shape Space
Yogesh Rathi, Samuel Dambreville, Marc Neithammer, James Malcolm, James Levitt, Martha E. Shenton, Allen Tannenbaum
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, Paris, France
2008

Age-related deficits in fronto-temporal connections in schizophrenia: A diffusion tensor imaging study
Gudrun Rosenberger, Marek Kubicki, Paul G. Nestor, Erin Connor, Georgia B. Bushell, Douglas Markant, Margaret Niznikiewicz, Carl-Fredrik Westin, Ron Kikinis, Andrew J. Saykin, Robert W. McCarley, Martha E. Shenton
Schizophrenia Research
2008
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Image Registration Assists Novice Operators in Ultrasound Assessment of Abdominal Trauma
Kirby G. Vosburgh, Jeffrey Stoll, Vicki Noble, Kilian Pohl, Raul San Jose Estepar, Barnabas Takacs
Studies in Health Technology and Informatics
2008

2007
References only

Open-Source Environment for Interactive Finite Element Modeling of Optimal ICD Electrode Placement
Matthew Jolley, Jeroen Stinstra, David Weinstein, Steve Pieper, Raul San Jose Estepar, Gordon Kindlmann, Rob MacLeod, Dana H. Brooks, John K. Triedman
Functional Imaging and Modeling of the Heart
2007
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Local Structure Tensor for Multidimensional Signal Processing. Applications to Medical Image Analysis
Raul San Jose Estepar
2007
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Towards scarless surgery: An endoscopic ultrasound navigation system for transgastric access procedures
Raul San Jose Estepar, Nicholas Stylopoulos, Randy Ellis, Eigil Samset, Carl-Fredrik Westin, Christopher Thompson, Kirby Vosburgh
Computer Aided Surgery
2007
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Techniques in the Contour Detection of Kidneys and Their Applications
M. Martin-Fernandez, L. Cordero-Grande, E. Munoz-Moreno, C. Alberola-Lopez
Biomechanical Systems Technology. Volume 4: General Anatomy
2007
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A Spatial Model of White Matter Fiber Tracts
Mahnaz Maddah, William M. Wells, S.K. Warfield, Carl-Fredrik Westin, W. Eric L. Grimson
Proceedings of the ISMRM Annual Meeting (ISMRM'07)
2007
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Delineating white matter structure in diffusion tensor MRI with anisotropy creases
Gordon Kindlmann, Xavier Tricoche, Carl-Fredrik Westin
Medical Image Analysis
2007
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Diffusion Tensor Analysis with Invariant Gradients and Rotation Tangents
Gordon Kindlmann, Daniel B. Ennis, Ross T. Whitaker, Carl-Fredrik Westin
IEEE Transactions on Medical Imaging
2007
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Oriented Speckle Reducing Anisotropic Diffusion
Karl Krissian, Carl-Fredrik Westin, Ron Kikinis, Kirby Vosburgh
IEEE Trans Image Process. 2007
2007
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New Perspectives on the Sources of White Matter DTI Signal
Sharon Peled
IEEE Transactions on Medical Imaging
2007
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Automatic Tractography Segmentation Using a High-Dimensional White Matter Atlas
Lauren J. O'Donnell, Carl-Fredrik Westin
IEEE Transactions on Medical Imaging
2007
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Characterizing Diffusion Along White Matter Tracts Affected by Primary Brain Tumors
Monica E. Lemmond, Lauren J. O'Donnell, Stephen Whalen, Alexandra J. Golby
Human Brain Mapping 2007
2007
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Fast BlockMatching Registration with Entropy-based Similarity
Eduardo Suarez-Santana, Rafael Nebot, Carl-Fredrik Westin, Juan Ruiz-Alzola
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), Brisbane, Australia
2007
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Tract-Based Morphometry
Lauren J. O'Donnell, Carl-Fredrik Westin, Alexandra J. Golby
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), Brisbane, Australia
2007
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Nonlinear Registration of Diffusion MR Images Based on Fiber Bundles
Ulas Ziyan, Mert R. Sabuncu, Lauren J. O'Donnell, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2007
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Hyperspherical von Mises-Fisher Mixture (HvMF) Modelling of High Angular Resolution Diffusion MRI
Abhir Bhalerao, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2007
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Outlier Rejection for Diffusion Weigthed Imaging
Marc Niethammer, Sylvain Bouix, Santiago Aja-Fernandez, Carl-Fredrik Westin, Martha E. Shenton
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2007
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Signal LMMSE Estimation from Multiple Samples in MRI and DT-MRI
Santiago Aja-Fernandez, Carlos Alberola-Lopez, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2007
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Gender Differences in the Severity of CT Emphysema in COPD
Mark T. Dransfield, George R. Washko, Marilyn G. Foreman, Raul San Jose Estepar, John Reilly, William C. Bailey
Chest
2007
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Two-Tensor Fiber Tractography
Orjan Bergmann, Gordon Kindlmann, Sharon Peled, Carl-Fredrik Westin
Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on Biomedical Imaging, Arlington, VA
2007
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A review of diffusion tensor imaging studies in schizophrenia
Marek Kubicki, Robert McCarley, Carl-Fredrik Westin, Hae-Jeong Park, Stephan Maier, Ron Kikinis, Ferenc A. Jolesz, Martha E. Shenton
Journal of Psychiatric Research
2007
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Preliminary results of nonfluoroscopy-based 3D navigation for neurointerventional procedures
Sonia Pujol, Kai Frerichs, Alexander Norbash, Ron Kikinis, Carl-Fredrik Westin
J Vasc Interv Radiol
2007
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The uncinate fasciculus and extraversion in schizotypal personality disorder: a diffusion tensor imaging study
Ronald J. Gurrera, Motoaki Nakamura, Marek Kubicki, Chandlee C. Dickey, Margaret A. Niznikiewicz, Martina M. Voglmaier, Robert W. McCarley, Martha E. Shenton, Carl-Fredrik Westin, Stephan E. Maier, Larry J. Seidman
Schizophrenia Research
2007
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A Robust Algorithm for Fiber-Bundle Atlas Construction
Ulas Ziyan, Mert R. Sabuncu, W. Eric. L. Grimson, Carl-Fredrik Westin
Mathematical Methods in Biomedical Image Analysis (MMBIA 2007): 2007 IEEE Workshop
2007
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Probabilistic Clustering and Quantitative Analysis of White Matter Fiber Tracts
Mahnaz Maddah, William M. Wells III, Simon K. Warfield, Carl-Fredrik Westin, W. Eric L. Grimson
Information Processing in Medical Imaging: 20th International Conference (IPMI 2007), Kerkrade, The Netherlands
2007
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Geodesic-Loxodromes for Diffusion Tensor Interpolation and Difference Measurement
Gordon Kindlmann, Raul San Jose Estepar, Marc Niethammer, Steven Haker, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'07), Brisbane, Australia
2007
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Natural Orifice Transluminal Endoscopic Surgery (NOTES): An Opportunity for Augmented Reality Guidance
Kirby G. Vosburgh, Raul San Jose Estepar
Studies in Health Technology and Informatics
2007
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EUS with CT improves efficiency and structure identification over conventional EUS
Kirby G. Vosburgh, Nicholas Stylopoulos, Raul San Jose Estepar, Randy E. Ellis, Eigil Samset, Christopher C. Thompson
Gastrointestinal Endoscopy
2007
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Interobserver Variability in the Determination of Upper Lobe-Predominant Emphysema
Craig P. Hersh, George R. Washko, Francine L. Jacobson, Ritu Gill, Raul San Jose Estepar, John J. Reilly, Edwin K. Silverman
Chest
2007
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On evaluating brain tissue classifiers without a ground truth
S. Bouix, M. Martin-Fernandez, L. Ungar, M. Nakamura M.-S. Koo, R. W. McCarley, M. E. Shenton
NeuroImage
2007
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Sequential Anisotropic Wiener Filtering Applied to 3D MRI Data
M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola, C.-F. Westin
Magnetic Resonance Imaging
2007
Download full paper [PDF] © Elsevier
Analysis of Ultrasound Images Based on Local Statistics. Application to the Diagnosis of Develpmental Dysplasia of the Hip
R. de-Luis-Garcia, S. Aja-Fernandez, R. Cardenez-Almeida, M. Martin-Fernandez, C. Alberola-Lopez
IEEE International Ultrasonics Symposium, New York, NY, USA
2007
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Parameter Estimation of the Homodyned K Distribution Based on Signal to Noise Ratio
M. Martin-Fernandez, R. Cardenes, C. Alberola-Lopez
IEEE International Ultrasonics Symposium, New York, NY, USA
2007
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UsimagTool: an Interactive Tool for Ultrasound Image Processing
R. Cardenes, A. Tristan, L. Cordero-Grande, E. Munoz-Moreno, M. Martin-Fernandez
IEEE Seventh International Symposium on BioInformatics and BioEngineering, Boston, MA, USA
2007
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Tissue Identification in Ultrasound Images using Rayleigh Local Parameter Estimation
S. Aja-Fernandez, M. Martin-Fernandez, C. Alberola-Lopez
IEEE Seventh International Symposium on BioInformatics and BioEngineering, Boston, MA, USA
2007
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Neural Network-Assisted Fiber Tracking of Synthetic and White Matter DT-MR Images
L. San-Jose-Revuelta, M. Martin-Fernandez, C. Alberola-Lopez
Lecture Notes in Engineering and Computer Science, World Congress on Engineering, London, UK
2007
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A New Proposal for 3D Fiber Tracking in Synthetic Diffusion Tensor Magnetic Resonance Images
L. San-Jose-Revuelta, M. Martin-Fernandez, C. Alberola-Lopez
IEEE International Symposium on Signal Processing and its Applications, Sharjah, United Arab Emirates
2007
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Comparison of fiber tracts derived from in-vivo DTI tractography with 3D histological neural tract tracer reconstruction on a macaque brain
Julien Dauguet, Sharon Peled, Vladimir Berezovskii, Thierry Delzescaux, Simon K. Warfield, Richard Born, Carl-Fredrik Westin
NeuroImage
2007
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Neocortical Gray Matter Volume in First Episode Schizophrenia and First Episode Affective Psychosis: A Cross-Sectional and Longitudinal MRI Study
M. Nakamura, D. F. Salisbury, Y. Hirayasu, S. Bouix, K. M. Pohl, T. Yoshida, M.S. Koo, M. E. Shenton, R. W. McCarley
Biological Psychiatry
2007

A Hierarchical Algorithm for MR Brain Image Parcellation
K. M. Pohl, S. Bouix, M. Nakamura, T. Rohlfing, R. W. McCarley, R. Kikinis, W. E. L. Grimson, Shenton, W. M. Wells
IEEE Transa on Medical Imaging
2007

Using the Logarithm of Odds to Define a Vector Space on Probablistic Atlases
K. M. Pohl, S. Bouix, M. E. Shenton, R. W. McCarley, W. E. L. Grimson, R. Kikinis, W. M.
Medical Image Analysis Press
2007

Prediction from off-grid samples using continuous normalized convolution
Kenneth Andersson, Carl-Fredrik Westin, Hans Knutsson
Signal Processing
2007

Retrieving Articulated 3-D Models Using Medial Surfaces
K. Siddiqi, J. Zhang, D. Macrini, A. Shokoufandeh, S. Bouix, R. Chen, S. Dickinson
Machine Vision and Applications
2007

Partial Volume Effect Modelling in Cardiac MRI by means of Mixture of Gaussians
P. de-la-Viuda-Garcia, P. Casaseca-de-la-Higuera, L. Cordero-Grande, G. Vegas-Sanchez-Ferrero, M. Martin-Fernandez, C. Alberola-Lopez
Fiveteenth Annual Symposium of the Spanish Biomedical Engineering Society, Cartagena, Spain
2007
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2006
References only

Orthogonal Tensor Invariants and the Analysis of Diffusion Tensor Magnetic Resonance Images
Daniel B. Ennis, Gordon Kindlmann
Magnetic Resonance in Medicine
2006
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Characterizing the Shape of Anatomical Structures with Poisson's Equation
H. Haidar, S. Bouix, J. J. Levitt, R. W. McCarley, M. E. Shenton, J. S. Soul
IEEE Transactions on Medical Imaging
2006

Smaller Neocortical Gray Matter and Larger Sulcal CSF Volumes in Neuroleptic-Naive Females with Schizotypal Personality Disorder
M.S. Koo, C. C. Dickey, H.J. Park, M. Kubicki, N. Y. Ji, S. Bouix, K. M. Pohl, M. E. Shenton J. J. Levitt M. Nakamura, R. W. McCarley
Archives of General Psychiatry
2006

Fast Block Matching Registration with Entropy-based Similarity
Eduardo Suarez-Santana, Rafael Nebot, Carl-Fredrik Westin, Juan Ruiz-Alzola
2006
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Geometrically constrained two-tensor model for crossing tracts in DWI
Sharon Peled, Ola Friman, Ferenc Jolesz, Carl-Fredrik Westin
Magnetic Resonance Imaging
2006
Download full paper [PDF] © Elsevier
Diffusion Tensor Visualization with Glyph Packing
Gordon Kindlmann, Carl-Fredrik Westin
IEEE Transactions on Visualization and Computer Graphics (Proceedings Visualization / Information Visualization 2006)
2006
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Complementary aspects of diffusion imaging and fMRI; I: structure and function.
R. Mulkern, P. Davis, S. Haker, R. San Jose Estepar, L. Panych, S. Maier, M. Rivkin
Magnetic Resonance Imaging
2006
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Cerebral White Matter Analysis Using Diffusion Imaging
Lauren O'Donnell
PhD Dissertation
Massachusetts Institute of Technology
2006
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Anisotropy Creases Delineate White Matter Structure in Diffusion Tensor MRI
Gordon Kindlmann, Xavier Tricoche, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag
High-Dimensional White Matter Atlas Generation and Group Analysis
Lauren O'Donnell, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag
3D Histological Reconstruction of Fiber Tracts and Direct Comparison with Diffusion Tensor MRI Tractography
Julien Dauguet, Sharon Peled, Vladimir Berezovskii, Thierry Delzescaux, Simon K. Warfield, Richard Born, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag
Affine and Deformable Registration Based on Polynomial Expansion
Gunnar Farnebck, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
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Segmentation of Thalamic Nuclei from DTI using Spectral Clustering
Ulas Ziyan, David Tuch, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag
Diffusion k-tensor estimation from Q-ball imaging using discretized principal axes
. Bergmann, G. Kindlmann, A. Lundervold, C.-F. Westin
Nineth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
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Fiber Bundle Estimation and Parameterization
Marc Niethammer, Sylvain Bouix, Carl-Fredrik Westin, Martha E. Shenton
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
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Accurate Airway Wall Estimation Using Phase Congruency
Raul San Jose Estepar, George G. Washko, Edwin K. Silverman, John J. Reilly, Ron Kikinis, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
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Towards Scarless Surgery: An Endoscopic-Ultrasound Navigation System for Transgastric Access Procedures
Raul San Jose Estepar, Nicholas Stylopoulos, Randy E. Ellis, Eigil Samset, Carl-Fredrik Westin, Chrisopsher Thompson, Kirby Vosburgh
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag
Novel real time tracking interface improves the use of laparoscopic and endoscopic ultrasound in the abdomen
Kirby G. Vosburgh, Nicholas Stylopoulos, Christopher C. Thompson, Randy E. Ellis, Eigil Samset, Raul San Jose Estepar
International Journal of Computer Assisted Radiology and Surgery
2006
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On Diffusion Tensor Estimation
M. Niethammer, Raul San Jose Estepar, Sylvain Bouix, Martha Shenton, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
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A New Method for Fiber Tractography in Diffusion Tensor Magnetic Resonance Images
L. San-Jose-Revuelta, M. Martin-Fernandez, C. Alberola-Lopez
2006 IEEE International Conference on Signal and Image Processing - ICSIP 2006, Hubli, India
2006
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A Speckle Removal Filter based on an Anisotropic Wiener Filter and the Rice Distribution
M. Martin-Fernandez, E. Munoz-Moreno, C. Alberola-Lopez
2006 IEEE International Ultrasonics Symposium, Vancouver, Canada
2006
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SIMILAR Tensor Arrays -A Framework for Storage of Tensor Data
A. Brun, M. Martin-Fernandez, B. Acar, E. Munoz-Moreno, L. Cammoun, A. Sigfridsson, D. Sosa, B. Svensson, M. Herberthson, H. Knutsson
SIMILAR NoE Tensor Workshop, Las Palmas de Gran Canaria, Spain
2006
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Registration of DTI
E. Munoz-Moreno, E. Suarez-Santana, M. Martin-Fernandez
SIMILAR NoE Tensor Workshop, Las Palmas de Gran Canaria, Spain
2006
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User Interfaces to Interact with Tensor Fields. A State-of-the-Art Analysis
S. Merino-Caviedes, D. Lopez-Ibanez, J. Garcia-Avedillo, M. Martin-Fernandez
SIMILAR NoE Tensor Workshop, Las Palmas de Gran Canaria, Spain
2006
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Endocardium and Epicardium Contour Modeling Based on Markov Random Fields and Active Contours
L. Cordero-Grande, P. Casaseca-de-la-Higuera, M. Martin-Fernandez, C. Alberola-Lopez
28th Annual International Conference of IEEE Engineering in Medicine and Biology Society, EMBC-2006, New York City, NY, USA
2006
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A Kernel-Based Approach for User-Guided Fiber Bundling using Diffusion Tensor Data
Raul San Jose Estepar, Marek Kubicki, Martha Shenton, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
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Image Quality Assessment based on Local Variance
Santiago Aja-Fernandez, Raul San Jose Estepar, Carlos Alberola Lopez, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
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Improving Deriche-style Recursive Gaussian Filters
Gunnar Farneback, Carl-Fredrik Westin
Journal of Mathematics in Imaging and Vision
2006

A Bayesian Approach for Stochastic White Matter Tractography
Ola Friman, Gunnar Farneback, Carl-Fredrik Westin
TMI
2006
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A High-Dimensional Fiber Tract Atlas
L. O'Donnell, C.-F. Westin
Proceedings of the ISMRM Annual Meeting (ISMRM'06), Seattle, USA
2006
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A new strategy for respiration compensation, applied toward 3D free-breathing cardiac MR imaging
Bruno Madore, Gunnar Farneback, Carl-Fredrik Westin, Maria Alejandra Duran Mendicuti
MRI
2006
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A Method for Clustering White Matter Fiber Tracts
L. O'Donnell, Kubicki M, M. E. Shenton, M. Dreusicke, W. E. L. Grimson, C.-F. Westin
AJNR
2006
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Tensor Field Regularization Using Normalized Convolution and Markov Random Fields in a Bayesian Framework
C.-F. Westin, M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola, H. Knutsson
Visualization and Image Processing of Tensor Fields. Series: Mathematics and Visualization
2006
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Fornix integrity and hippocampal volume in male schizophrenic patients
N. Kuroki, M. Kubicki, P. G. Nestor D. F. Salisbury, H. J. Park, J. J. Levitt, S. Woolston, M. Frumin, M. Niznikiewicz, C.-F. Westin, S. E. Maier, R. McCarley, M. E. Shenton
Biol Psychiatry
2006
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Weaning from Mechanical Ventilation: a Multimodal Signal Analysis
J. P. Casaseca, M. Martin-Fernandez, C. Alberola-Lopez
IEEE Transactions on Biomedical Engineering
2006
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2005
References only

Visualization of tensor fields using superquadric glyphs
DB. Ennis, G. Kindlmann, I. Rodriguez, PA. Helm, ER. McVeigh
Magnetic Resonance in Medicine
2005

Optics, Mechanics, and Hamilton-Jacobi Skeletons
S. Bouix, K. Siddiqi
Advances in Imaging and Electron Physics
2005
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Fusion and Fission
M. Barlaud, N. O. Bernsen, J. Coutaz, J.-L. Dugelay, B. Macq, M. Martin-Fernandez, L. Nigay, F. Paterno, M. Strinzis, M. Tekalp, J.-F. Thiran, D. Tzovaras, J. Vanderdonckt, S. Valoshynovskiyi
SIMILAR Dreams: Multimodal Interfaces in Our Future Live
2005
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Ten Major Achievements
M. Barlaud, N. O. Bernsen, J. Coutaz, J.-L. Dugelay, B. Macq, M. Martin-Fernandez, L. Nigay, F. Paterno, M. Strinzis, M. Tekalp, J.-F. Thiran, D. Tzovaras, J. Vanderdonckt, S. Valoshynovskiyi
SIMILAR Dreams: Multimodal Interfaces in Our Future Live
2005
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Ten Major Practical Outcomes
M. Barlaud, N. O. Bernsen, J. Coutaz, J.-L. Dugelay, B. Macq, M. Martin-Fernandez, L. Nigay, F. Paterno, M. Strinzis, M. Tekalp, J.-F. Thiran, D. Tzovaras, J. Vanderdonckt, S. Valoshynovskiyi
SIMILAR Dreams: Multimodal Interfaces in Our Future Live
2005
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Ten Major Challenges
M. Barlaud, N. O. Bernsen, J. Coutaz, J.-L. Dugelay, B. Macq, M. Martin-Fernandez, L. Nigay, F. Paterno, M. Strinzis, M. Tekalp, J.-F. Thiran, D. Tzovaras, J. Vanderdonckt, S. Valoshynovskiyi
SIMILAR Dreams: Multimodal Interfaces in Our Future Live
2005
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Uncertainty in Fiber Tractography
O. Friman, C.-F. Westin
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005
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A Hamilton-Jacobi-Bellman Approach to High Angular Resolution Diffusion Tractography
E. Pichon, C.-F. Westin, A. Tannenbaum
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005
Download full paper [PDF] © Springer-Verlag
Two Methods for Validating Brain Tissue Classifiers
M. Martin-Fernandez, S. Bouix, L. Ungar, R. W. McCarley, M. E. Shenton
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005
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White Matter Tract Clustering and Correspondence in Populations
L. O'Donnell, C.-F. Westin
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005
Download full paper [PDF] © Springer-Verlag
A segmentation and reconstruction technique for 3D vascular structures
V. Luboz, X. Wu, K. Krissian, C.F. Westin, R. Kikinis, S. Cotin, S. Dawson
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005

Riemannian Mean Curvature Flow
R. San Jose Estepar, S. Haker, C.-F. Westin
ISCV '05
2005
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Pull-push level sets: a new term to encode prior knowledge for the segmentation of teeth images
Rodrigo de Luis Garcia, Raul San Jose Estepar, Carlos Alberola-Lopez
Medical Imaging 2005: Image Processing
2005

Local Structure Tensor for Multidimensional Signal Processing. Applications to Medical Image Analysis.
R. San Jose Estepar
PhD Dissertation
University of Valladolid, Spain
2005
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The application of dti to investigate white matter abnormalities in schizophrenia
M. Kubicki, C.-F. Westin, R. McCarley, M. E. Shenton
Ann NY Acad Sci
2005
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Group-Slicer: a Collaborative Extension of the 3D-Slicer
Federico Simmross-Wattenberg, Noemi Carranza-Herrezuelo, Cristina Palacios-Camarero, Juan Pablo Casaseca de la Higuera, Miguel Angel Martin-Fernandez, Santiago Aja-Fernandez, Juan Ruiz-Alzola, Carl-Fredrik Westin, Carlos Alberola-Lopez
Journal of Biomedical Informatics
2005

A tensor-like representation for averaging, filtering and interpolation of 3-D object orientation data
A. Brun, C.-F. Westin, S. Haker, H. Knutsson
Proceedings of the IEEE-ICIP, Genoa, Italy
2005
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Fast Manifold Learning Based on Riemannian Normal Coordinates
A. Brun, C.-F. Westin, M. Herberthson, H. Knutsson
Proceedings of the SCIA;05, Joensuu, Finland
2005

Examining the Whiteness of fMRI Noise
O. Friman, I. Morocz, C.-F. Westin
ISMRM'05, Miami, USA
2005

Speckle-Constrained Anisotropic Diffusion for Ultrasound Images
Karl Krissian, Kirby Vosburgh, Ron Kikinis, Carl-Fredrik Westin
CVPR'05, San Diego CA, USA
2005

Resampling fMRI Time Series
O. Friman, C.-F. Westin
NeuroImage
2005
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DTI and MTR Abnormalities in Schizophrenia: Analysis of White Matter Integrity
M. Kubicki, H.-J. Park, C.-F. Westin, P. Nestor, R. Mulkern, S. E. Maier, M. Niznikiewicz, E. Connor, J. Levitt, M. Frumin, R. Kikinis, F. A. Jolesz, R. McCarley, M. E. Shenton
Neuroimage
2005
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Fronto-Temporal Disconnectivity in Schizotypal Personality Disorder: A Diffusion Tensor Imaging Study
M. Nakamura, R. W. McCarley, M. Kubicki, C. C. Dickey, M. A. Niznikiewicz, M. M. Voglmaier, L. J. Seidman, S. E. Maier, C.-F. Westin, R. Kikinis, M. E. Shenton
Biological Psychiatry
2005
Download full paper [PDF] © Society of Biological Psychiatry
Automatic Evaluation of Brain MR Segmentation Techniques by Level of Agreement
S. Bouix, M. Martin-Fernandez, L. Ungar, M. Shenton, R. McCarley
11th Annual Meeting of the Organization for the Human Brain Mapping, Toronto, ON, Canada
2005
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On Low Order Moments for the Homodyned K Distribution
M. Martin-Fernandez, C. Alberola-Lopez
Ultrasonics
2005
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An Approach for Contour Detection of Human Kidneys from Ultrasound Images using Markov Random Fields and Active Contours
M. Martin-Fernandez, C. Alberola-Lopez
Medical Image Analysis
2005
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Fast Sub-Voxel Re-initialization of the Distance Map for Level Set Methods
K. Krissian, C.-F. Westin
Pattern Recognition Letters
2005

Rigid overlay of volume sonography and MR image data
J. Verhey, and J. Wisser, T. Keller, C.-F. Westin, R. Kikinis
Computerized Medical Imaging and Graphics
2005
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Articulated Registration: Elastic Registration based on a Wire-Model
M. A. Martin-Fernandez, E. Munoz-Moreno, M. Martin-Fernandez, C. Alberola-Lopez
Medical Imaging 2005: Image Processing, San Diego, CA, USA
2005
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In Vivo Visualization of White Matter Fiber Tracts of Preterm- and Term- Infant Brain with Diffusion Tensor MRI
S.-S. Yoo, H. J. Park, J. S. Soul, H. Mamata, C.-F. Westin, H. Bassan, A. J. Du Plessis, R. L. Robertson, S. A. Ringer, S. E. Maier, J. J. Volpe, G. P. Zientara
Investigative Radiology
2005
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Capturing Intraoperative Deformations: Research Experience At The Surgical Planning Laboratory
S. K. Warfield, S. J. Haker, I.-F. Talos, C. A. Kemper, N. Weisenfeld, A. Mewes, D. Goldberg-Zimring, K. H. Zou, C.-F. Westin, W. M. Wells, C. M. C. Tempany, A. Golby, P. M. Black, F. A. Jolesz, R. Kikinis
Medical Image Analysis
2005
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Identification of translational displacements between N-dimensional data sets using the high order SVD and phase correlation
W. Scott Hoge, Carl-Fredrik Westin
IEEE Transactions on Image Processing
2005
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Kriging Filters for Multidimensional Signal Processing
J. Ruiz-Alzola, C. Alberola-Lopez, C.-F. Westin
Signal Processing
2005
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An in vivo MRI study of prefrontal cortical complexity in first episode psychosis
Laura C. Wiegand, Simon K. Warfield, James J. Levitt, Yoshio Hirayasu, Dean F. Salisbury, S. Heckers, Sylvain Bouix, Daniel Schwartz, Magdalena Spencer, Chandley C. Dickey, Ron Kikinis, Ferenc A. Jolesz, Robert W. McCarley, Martha E. Shenton
American Journal of Psychiatry
2005

Flux Driven Automatic Centerline Extraction
Sylvain Bouix, Kaleem Siddiqi, Allen Tannenbaum
Medical Image Analysis
2005

Hippocampal Shape Analysis using Medial Surfaces
Sylvain Bouix, Jens C. Pruessner, D. Louis Collins, Kaleem Siddiqi
NeuroImage
2005

2004
References only

Clustering Fiber Tracts Using Normalized Cuts
A. Brun, H. Knutsson, H. J. Park, M. E. Shenton, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag
Interface Detection in DTMRI
L. O'Donnell, W. E. L. Grimson, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag
Anisotropic Interpolation of DT-MRI Data
C. A. Castano-Moraga, M. A. Rodrigues-Florido, L. Alvarez, C.-F. Westin, J. Ruiz-Alzola
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag
Robust Generalized Total Least Squares Iterative Closest Point Registration
R. San Jose Estepar, A. Brun, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag
Bias in Resampling-Based Thresholding of Statistical Maps in fMRI
O. Friman, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag
An Analysis Tool for Quantification of Diffusion Tensor Imaging
H.-J. Park, M. E. Shenton, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag
3D Bayesian Regularization of Diffusion Tensor MRI using Multivariate Gaussian Markov Random Fields
M. Martin-Fernandez, C.-F. Westin, C. Alberola-Lopez
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
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A Method for the Analysis of the Geometrical Relationship between White Matter Pathology and the Vascular Architecture of the Brain
D. Kozinska, C. Holland, K. Krissian, C.-F. Westin, C. R. G. Guttmann
Neuroimage
2004
Download full paper [PDF] © Elsevier
White Matter Hemisphere Asymmetries in Healthy Subjects and in Schizophrenia: A Diffusion Tensor MRI Study
H. J. Park, C.-F. Westin, M. Kubicki, S. E. Maier, M. Niznikiewicz, A. Baer, M. Frumin, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Neuroimage
2004
Download full paper [PDF] © Elsevier
Detection and Detrending in Functional MRI Data Analysis
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2004
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Comments on: A Methodology for Evaluation of Boundary Detection Algorithms on Medical Images
C. Alberola-Lopez, M. Martin-Fernandez, J. Ruiz-Alzola
IEEE Transactions on Medical Imaging
2004
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Subspace Models for Functional MRI Data Analysis
O. Friman
ISBI'04, Arlington, VA, USA
2004
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A novel approach to averaging, filtering and interpolation of 3-D object orientation data
A. Brun, C.-F. Westin, S. Haker, H. Knutsson
Proceedings of the Swedish Symposium on Image Analysis, Uppsala, Sweden
2004

Method for Combining Information from White matter Fiber Tracking and Gray Matter Parcellation
H. J. Park, M. Kubicki, C.-F. Westin, I. F. Talos, A. Brun, S. Pieper, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
American Journal of Neuroradiology
2004
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Biexponential Diffusion Tensor Analysis of Human Brain Diffusion Data
S. E. Maier, S. Vajapeyam, H. Mamata, C.-F. Westin, F. A. Jolesz, R. V. Mulkern
Magnetic Resonance in Medicine
2004
Download full paper [PDF] © Wiley
Comparison of Single-shot Echo-planar and Line Scan Protocols for Diffusion Tensor Imaging
M. Kubicki, S. E. Maier, C.-F. Westin, H. Mamata, H. Ersner-Hershfield, R. San Jose Estepar, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Academic Radiology
2004
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Shape of the Caudate Nucleus and its Cognitive Correlates in Neuroleptic-Naive Schizotypal Personality Disorder
J. J. Levitt, C.-F. Westin, P. G. Nestor, R. San Jose Estepar, C. C. Dickey, M. M. Voglmaier, L. J. Seidman, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Biological Psychiatry
2004
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Fast Sub-voxel Reinitialization of the Distance Map for Level Set Methods
Karl Krissian, Carl-Fredrik Westin
Report 0001, Department of Radiology, Brigham and Women's Hospital, Harvard Medical School
2004
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Using 3D Convex Hulls to Detect Coronary Artery Stenoses and Atherosclerotic Vessel Wall Lesions in Contrast Enhanced MDCT Images
Arne Hans, Karl Krissian, U. Joseph Schoepf, Ron Kikinis, Carl-Fredrik Westin
Report 0002, Department of Radiology, Brigham and Women's Hospital, Harvard Medical School
2004
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Algorithms for Extracting Vessel Centerlines
Karl Krissian, Ron Kikinis, Carl-Fredrik Westin
Report 0003, Department of Radiology, Brigham and Women's Hospital, Harvard Medical School
2004
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Anisotropic Diffusion of Ultrasound Constrained by Speckle Noise Model
Karl Krissian, Kirby Vosburgh, Ron Kikinis, Carl-Fredrik Westin
Report 0004, Department of Radiology, Brigham and Women's Hospital, Harvard Medical School
2004
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Anatomical Guided Segmentation with Non-Stationary Tissue Class Distributions in an Expectation-Maximization Framework
Kilian Pohl, W. Eric L. Grimson, Sylvain Bouix, Ron Kikinis
ISBI, Arlington, VA, USA
2004

An Elliptic PDE Approach for Shape Characterization
Haissam Haidar, Sylvain Bouix, James Levitt, Robert W. McCarley, Martha E. Shenton, Janet S. Soul
EMBS, san Francisco, CA, USA
2004

Characterizing the Shape of Anatomical Structures with Poisson's Equation
Haissam Haidar, Sylvain Bouix, James Levitt, Chandley C. Dickey, Robert W. McCarley, Martha E. Shenton, Janet S. Soul
MICCAI, Saint Malo, France
2004

Evaluating Automatic Brain Tissue Classifiers
Sylvain Bouix, Lida Ungar, Chandlee C. Dickey, Robert W. McCarley, Martha E. Shenton
MICCAI, Saint Malo, France
2004

2003
References only

Subspace identification extension to the phase correlation method
W. Scott Hoge
IEEE Transactions on Medical Imaging
2003
Download full paper [PDF] © IEEE
Adaptive Analysis of Functional MRI Data
O. Friman
PhD Dissertation
Linkping University, Sweden
2003
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Adaptive Analysis of fMRI Data
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2003
Download full paper [PDF] © Elsevier
Level set-based integration of segmentation and computational fluid dynamics for flow correction in phase contrast angiography.
M. Watanabe, R. Kikinis, C.-F. Westin
Academic Radiology
2003
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Spatial Normalization of Diffusion Tensor MRI Using Multiple Channels
H. J. Park, M. Kubicki, M. E. Shenton, A. Guimond, R. W. McCarley, S. E. Maier, R. Kikinis, F. A. Jolesz, C.-F. Westin
Neuroimage
2003
Download full paper [PDF] © Elsevier
A Theoretical Framework to Three-Dimensional Ultrasound Reconstruction from Irregularly-Sample Data
R. San Jose Estepar, M. Martin-Fernandez, P.P. Caballero-Martinez, C. Alberola-Lopez, J. Ruiz-Alzola
Ultrasound in Medicine and Biology
2003
Download full paper [PDF] © Elsevier
Cingulate Fasciculus Integrity Disruption in Schizophrenia: A Magnetic Resonance Diffusion Tensor Imaging Study
M. Kubicki, C.-F. Westin, S. E. Maier, H. Mamata, M. Frumin, H. Ernst-Hirshefeld, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Biological Phychiatry
2003
Download full paper [PDF] © Society of Biological Psychiatry
Homomorphic Filtering of DT-MRI Fields
C. A. Castano-Moraga, C.-F. Westin, J. Ruiz-Alzola
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Montreal, Canada
2003
Download full paper [PDF] © Springer-Verlag
Freehand Ultrasound Reconstruction Based on ROI Prior Modeling and Normalized Convolution
R. San Jose Estepar, M. Martin-Fernandez, C. Alberola-Lopez, J. Ellsmere, R. Kikinis, C.-F. Westin
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Lecture Notes in Computer Science 2879, Montreal, Canada
2003
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Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image Guided Neurosurgery
I. F. Talos, L. O'Donnell, C.-F. Westin, S. K. Warfield, W. M. Wells, S. S. Yoo, L. Panych, A. Golby, H. Mamata, S. E. Maier, P. Ratiu, C. G. Guttmann, P. Mc. L. Black, F. A. Jolesz, R. Kikinis
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Montreal, Canada
2003
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Regularization of Diffusion Tensor Maps Using a Non-Gaussian Markov Random Field Approach
M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola, C.-F. Westin
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Lecture Notes in Computer Science 2879, Montreal, Canada
2003
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Tensor Splats: Visualising Tensor Fields by Texture Mapped Volume Rendering
A. Bhalerao, C.-F. Westin
CIMIT, Montreal, Canada
2003
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Geostatistical Medial Image Registration
J. Ruiz-Alzola, E. Suarez, C. Alberola-Lopez, S. K. Warfield, C.-F. Westin
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Montreal, Canada
2003
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Registration of multi-dimensional image data via sub-pixel resolution phase correlation
W. S. Hoge, D. Mitsouras, F. R. Rybicki, R. V. Mulkern, C.-F. Westin
ICIP, Barcelona, Spain
2003
Download full paper [PDF] © ICIP03
A Fully Automatic Algorithm for Contour Detection of Bones in Hand Radiographs using Active Contours
R. de-Luis, M. Martin-Fernandez, M. Martin, C. Alberola-Lopez
Proceedings of the IEEE International Conference on Image Processing (ICIP'03), Barcelona, Spain
2003
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Multiscale Segmentation of the Aorta in 3D Ultrasound Images
K. Krissian, J. Ellsmere, K. Vosburgh, R. Kikinis, C.-F. Westin
EMBS, Cancun, Mexico
2003
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A Model-Based Algorithm for the Automatic Segmentation of Metacarpals in Hand-Wrist Radiographs using Active Contours
R. de-Luis, M. Martin-Fernandez, M. Martin, C. Alberola-Lopez
Proceedings of the Third Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery (CAOS'03), Marbella, Spain
2003
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Diffusion tensor visualization using random field correlation and volume rendering
Andreas Sigfridsson, Raul San Jose Estepar, Lars Wigstrom, Carlos Alberola-Lopez, Carl-Fredrik Westin
Proc. of th 9th International Workshop on Computer Aided Systems Theory, Las Palmas de Gran Canaria, Spain
2003

Shape Alignment based on Phase Spectrum and ICA
Raul San Jose Estepar, Carlos Alberola-Lopez, Juan Ruiz-Alzola, Ron Kikinis, Carl-Fredrik Westin
Computer Aided Systems Theory (EUROCAST'03), Las Palmas de Gran Canaria, Spain
2003

Fast and Accurate Redistancing for Level Set Methods
Karl Krissian, Carl-Fredrik Westin
EUROCAST, Las Palmas de Gran Canaria, Spain
2003
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Tensor field regularization using normalized convolution
Carl-Fredrik Westin, Hans Knutsson
Computer Aided Systems Theory (EUROCAST'03), LNCS 2809, Las Palmas de Gran Canaria, Spain
2003
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Anisotropic Regularization of Posterior Probability Maps Using Vector Space Projections
M. A. Rodriguez-Florido, R. Cardenes, C.-F. Westin, C. Alberola-Lopez, J. Ruiz-Alzola
Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
Download full paper [PDF] © SpringerVerlag
Fast Entropy-Based Nonrigid Registration
E. Suarez, J. A. Santana, Eduardo Rovaris, C.-F. Westin, J. Ruiz-Alzola
Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
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A Novel Gauss-Markov Random Field Approach for Regularization of Diffusion Tensor Maps
M. Martin-Fernandez, R. San Jose Estepar, C.-F. Westin, C. Alberola-Lopez
Ninth International Conference on Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
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A Novel Gauss-Markov Random Field Approach for Regularization of Diffusion Tensor Maps
M. Martin-Fernandez, R. San Jose Estepar, C.-F. Westin, C. Alberola-Lopez
Abstracts of the Ninth International Conference on Computer Aided Systems Theory (EUROCAST'03), Las Palmas de Gran Canaria, Spain
2003
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Coloring of DT-MRI FIber Traces using Laplacian Eigenmaps
Anders Brun, Hae-Jeong Park, Hans Knutsson, Carl-Fredrik Westin
Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
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Automatic Bone Age Assessment: A Registration Approach
M. Martin, M. Martin-Fernandez, C. Alberola-Lopez
Medical Imaging 2003: Image Processing, San Diego, CA, USA
2003
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Capturing Brain Deformation
Simon K. Warfield, Florin Talos, Corey Kemper, Lauren O'Donnell, Carl-Fredrik Westin, William M. Wells, Peter Mc L. Black, Ferenc A. Jolesz, Ron Kikinis
Surgery Simulation and Soft Tissue Modeling, International Symposium, IS4TM 2003, LNCS 2673, Juan-Les-Pins, France
2003

Medial Surfaces
Sylvain Bouix
PhD Dissertation
School of Computer Science, McGill University
2003

Flux Driven Fly Throughs
Sylvain Bouix, Kaleem Siddiqi, Allen Tannenbaum
Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'03), Madison, WI, USA
2003

2002
References only

Recognizing Emphysema - A Neural Network Approach
O. Friman, M. Borga, M. Lundberg, U. Tyl�Á�n, H. Knutsson
ICPR'02
2002
Download full paper [PDF]
Hierarchical Temporal Blind Source Separation of fMRI Data
O. Friman, M. Borga, P. Lundberg, H. Knutsson
ISMRM'02, Honolulu, Hawaii
2002
Download full paper [PDF]
Detecting Neural Activity in fMRI using Maximum Correlation Modeling
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2002
Download full paper [PDF] © Elsevier
Exploratory fMRI Analysis by Autocorrelation Maximization
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2002
Download full paper [PDF] © Elsevier
Diffusion Tensor Imaging And Its Application To Neuropsychiatric Disorders
M. Kubicki, C.-F. Westin, S. E. Maier, H. Mamata, M. Frumin, H. Ernst-Hirshefeld, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Harvard Rev of Psychiatry
2002
Download full paper [PDF] © 2002 President and Fellows of Harvard College
Uncinate Fasciculus Findings in Schizophrenia: A Magnetic Resonance Diffusion Tensor Imaging Study
M. Kubicki, C.-F. Westin, S. E. Maier, M. Frumin, P. G. Nestor, D. Salisbury, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
AmJPsych
2002
Download full paper [PDF]
High-Resolution Line-Scan Diffusion-Tensor MRI of White Matter Fiber Tract Anatomy
H. Mamata, Y. Mamata, C.-F. Westin, M. E. Shenton, F. A. Jolesz, S. E. Maier
American Journal of NeuroRadiology
2002
Download full paper [PDF] © American Society of Neuroradiology
Processing and Visualization of Diffusion Tensor MRI
C.-F. Westin, S. E. Maier, H. Mamata, A. Nabavi, F. A. Jolesz, R. Kikinis
Medical Image Analysis
2002
Download full paper [PDF] © Elsevier
Nonrigid Registration of 3D Tensor Medical Data
J. Ruiz-Alzola, C.-F. Westin, S. K. Warfield, C. Alberola, S. E. Maier, R. Kikinis
Medical Image Analysis
2002
Download full paper [PDF] © Elsevier
Magnetic Resonance Diffusion Tensor Imaging - A Tool for Non-invasive exploration of neuroanatomy
S. E. Maier, H. Mamata, C.-F. Westin, R. V. Mulkern
International Symposium for Young Researchers on 'Modeling and their Applications 2002' (IA'02), Osaka, Japan
2002

Flux-based Anisotropic Diffusion Applied to Enhancement of 3D Angiograms
K. Krissian
IEEE Transactions on Medical Imaging
2002

A Bayesian Approach to in vivo Kidney Ultrasound Contour Detection
M. Martin-Fernandez, C. Alberola-Lopez
MICCAI, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag
Nonridgid Registration using Regularized Matching Weighted by Local Structure
E. Suarez, C.-F. Westin, E. Rovaris, J. Ruiz-Alzola
MICCAI, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag
Intra-patient Prone to Supine Colon Registration for Synchronized Colonoscopy
D. Nain, S. Haker, W. E. L. Grimson, E. Cosman Jr., W. M. Wells, H. Ji, R. Kikinis, C.-F. Westin
MICCAI, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag
Level Set Based Integration of Segmentation and Computational Fluid Dynamics for Flow Correction in Phase Contrast Angiography
M. Watanabe, R. Kikinis, C.-F. Westin
MICCAI, Tokyo, Japan
2002
© Springer-Verlag
New Approaches to Estimation of White Matter Connectivity in Diffusion Tensor MRI: Elliptic PDEs and Geodesics in a Tensor-Warped Space
L. O'Donnell, S. Haker, C.-F. Westin
MICCAI'02, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag
Regularized Stochastic White Matter Tractography Using Diffusion Tensor MRI
M. Bjrnemo, A. Brun, R. Kikinis, C.-F. Westin
MICCAI'02, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag
Deformable registration of DT-MRI data based on transformation invariant tensor characteristics
A. Guimond, C. R. G. Guttmann, S. K. Warfield, C.-F. Westin
ISBI, Washington (DC), USA
2002
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Deformable registration of DT-MRI data based on invariant tensor characteristics
A. Guimond, C.-F. Westin, L. P. Panych, C. R. G. Guttmann
HBM, Sendai, Japan
2002

White Matter Tractography Using Sequential Importance Sampling
A. Brun, M. Bjrnemo, R. Kikinis, C.-F. Westin
Proceedings of the ISMRM Annual Meeting (ISMRM'02), Honolulu, Hawaii
2002
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Angle-Preserving Mappings for the Visualization of Multi-branched Vessels
Lei Zhu, Sylvain Bouix, Steven Haker, Kaleem Siddiqi, Allen Tannenbaum
ICIP, Rochester, NY
2002

Hamilton-Jacobi Skeletons
Kaleem Siddiqi, Sylvain Bouix, Allen Tannenbaum, Steven W. Zucker
International Journal of Computer Vision
2002

2001
References only

Reshaping polygonal meshes with smoothed normals extracted from Ultrasound volume data : an optimization approach
Raul San Jose Estepar, Carlos Alberola-Lopez, Juan Ruiz
Medical Imaging 2001: Ultrasonic Imaging and Signal Processing, San Diego, USA
2001

Semi-Automatic Medical Image Segmentation
Lauren O'Donnell
2001
Download full paper [PDF]
An Integrated Visualization System for Surgical Planning and Guidance Using Image Fusion and an Open MR
David T. Gering MS, Arya Nabavi MD, Ron Kikinis, Lauren J. O'Donnell BS, W. Eric L. Grimson PhD, Ferenc Peter M. Black MD, William M. Wells III. PhD
Journal od Magentic Resonance Imaging
2001
Download full paper [PDF]
Maximum Likelihood Contour Estimation using Beta-Statistics in Ultrasound Images
M. Martin-Fernandez, R. San Jose Estepar, C. Alberola-Lopez
Proceedings of the IEEE-EURASIP Image and Signal Processing and Analysis (ISPA'01), Pula, Croatia
2001
Download full paper [PDF] © IEEE
Detection of neural activity in functional MRI using Canonical Correlation Analysis
O. Friman, J. Carlsson, P. Lundberg, M. Borga, H. Knutsson
Magnetic Resonance in Medicine
2001
Download full paper [PDF] © Wiley
Detection of Landmarks in Multidimensional Tensor Data
J. Ruiz-Alzola, R. Kikinis, C.-F. Westin
Signal Processing
2001
Download full paper [PDF] © Elsevier
CURVES: Curve Evolution for Vessel Segmentation
L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, R. Keriven, R. Kikinis, A. Nabavi, C.-F. Westin
Medical Image Analysis
2001

Three-dimensional Adaptive Filtering in Magnetic Resonance Angiography
C.-F. Westin, L. Wigstrm, T. Loock, L. Sjkvist, R. Kikinis, H. Knutsson
Journal of Magnetic Resonance Imaging
2001
Download full paper [PDF] © Wiley
Serial Intraoperative MR Imaging of Brain Shift
A. Nabavi, P. Mc. L. Black, D. T. Gering, C.-F. Westin, V. Metha, R. S. Pergolizzi, Jr., M. Ferrant, S. K. Warfield, N. Hata, R. B. Schwarts, W. M. Wells, R. Kikinis, F. A. Jolesz
Neurosurgery
2001
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General Approach to Nonrigid Registration: Decoupled Optimization
E. Suarez, R. Cardenes, C. Alberola, C.-F. Westin, J. Ruiz-Alzola
23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC '01)
2001

Artifact reduction in sinc interpolation using adaptive filtering
M. A. Rodrigues-Florido, J. Ruiz-Alzola, C.-F. Westin
Proc. IEEE International Conf on Image Processing, Thessaloniki, Greece
2001

Phase-driven Finite Element Model for Spatio-temporal Tracking in Tagged Cardiac MRI
I. Haber, R. Kikinis, C.-F. Westin
MICCAI, Utrecht, Netherlands
2001
Download full paper [PDF] © Springer-Verlag
Phase-Based User-Steered Image Segmentation
L. O'Donnell, C.-F. Westin, W. E. L. Grimson, J. Ruiz-Alzola, M. E. Shenton, R. Kikinis
MICCAI, Utrecht, Netherlands
2001
Download full paper [PDF] © Springer-Verlag
Comparison of Two Restoration Techniques in the Context of 3D Medical Imaging
M. A. Rodrigues-Florido, K. Krissian, J. Ruiz-Alzola, C.-F. Westin
MICCAI, Utrecht, Netherlands
2001
Download full paper [PDF] © Springer-Verlag
Contributions to Automatic and Semiautomatic Analysis of Three-Dimensional Fetal Echography using Active Contours and Markov Random Fields
M. Martin-Fernandez
PhD Dissertation
Valladolid University, Spain
2001
Download full paper [PDF]
Morphometric Magnetic Resonance Imaging studies: Findings in Schizophrenia
M. E. Shenton, M. Frumin, R. W. McCarley, S. E. Maier, C. F. Westin, I. A. Fischer, C. Dickey, R. Kikinis
Psychiatric Neuroimaging Research: Contemporary Strategies
2001

Hippocampal Shape Analysis Using Medial Surfaces
Sylvain Bouix, Jens C. Pruessner, D. Louis Collins, Kaleem Siddiqi
MICCAI, Utrecht, The Netherlands
2001

2000
References only

Kalman filter technique applied to surface reconstruction and visualization from noisy volume data
Raul San Jose Estepar, Alberto Rivera, Marco Pinacho, Carlos Alberola-Lopez, Juan Ruiz
Medical Imaging 2000: Ultrasonic Imaging and Signal ProcessingFourth International Conference on Medical Image Computing and, San Diego, USA
2000

Sensitivity Profiles from an Array of Coils for Encoding and Reconstruction in Parallel (SPACE RIP)
W. E. Kyriakos, L. P. Panych, D. F. Kacher, C.-F. Westin, S. M. Bao, R. V. Mulkern, F. A. Jolesz
Magnetic Resonance in Medicine
2000

Intraoperative MRI for the resection of intracranial vascular malformation
A. Nabavi, R. S. Pergolizzi Jr RS, C. Martin, R. B. Schwartz, R. M. Friedlander, D. Kacher, C.-F. Westin, R. Kikinis, E. Alexander III, P. Mc. L. Black, F. A. Jolesz, P. E. Stieg
Stroke
2000

Tissue Classification Based on 3D Local Intensity Structure for Volume Rendering
Y. Sato, C.-F. Westin, A. Bhalerao, S. Nakajima, N. Shiraga, S. Tamura, R. Kikinis
IEEE Trans on Visualization and Computer Graphics
2000
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Cingulum Bundle in Schizophrenics: Diffusion Tensor Study
M. R. Kubicki, C.-F. Westin, R. W. McCarley, S. E. Maier, R. Kikinis, M. E. Shenton
Supplement to Radiology
2000

Nonrigid Registration of 3D Scalar Vector and Tensor Medical Data
J. Ruiz-Alzola, C.-F. Westin, S. K. Warfield, A. Nabavi, R. Kikinis
Proceedings of MICCAI 2000, Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh
2000
Download full paper [PDF] © Springer-Verlag
diSNei: A Collaborative Environment for Medical Images Analysis and Visualization
C. Alberola-Lopez, R. Cardenes, M. Martin-Fernandez, M. Martin, M. A. Rodriguez-Florido, J. Ruiz-Alzola
MICCAI, Pittsburgh, PA, USA
2000
Download full paper [PDF] © Springer-Verlag
Segmentation by Adaptive Geodesic Active Contours
C.-F. Westin, L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, S. Dawson, A. Norbash, R. Kikinis
Proceedings of MICCAI 2000, Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh
2000
Download full paper [PDF] © Springer-Verlag
A Coding Technique with Progressive Reconstruction Based on VQ and Entropy Coding Applied to Medical Images
M. Martin-Fernandez, C. Alberola-Lopez, D. Guerrero, J. Ruiz-Alzola
Applications of Digital Image Processing XXIII, Proceedings of the SPIE 4115, San Diego, CA, USA
2000
Download full paper [PDF] © SPIE
Energy Functions for the Segmentation of Ultrasound Volume Data using Active Rays
M. Martin-Fernandez, E. Rodriguez, D. Tejada, C. Alberola-Lopez, J. Ruiz-Alzola
Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'00), Istanbul, Turkey
2000
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Affine Adaptive Filtering of CT Data
C.-F. Westin, J. Richolt, V. Moharir, R. Kikinis
Medical Image Analysis
2000
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Image Guided Surgery
W. E. L. Grimson, M. Leventon, L. M. Lorigo, T. Kapur, O. D. Faugeras, R. Kikinis, R. Keriven, A. Nabavi, C.-F. Westin
Fourth International Workshop on Algorithmic Foundations of Robotics (WAFR), Hanover, NH, USA
2000

Co-Dimension 2 Geodesic Active Contours
L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, R. Keriven, R. Kikinis, C.-F. Westin
Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'02), South Carolina, USA
2000

Physics-Based Skeletons
Sylvain Bouix, Pavel Dimitrov, Kaleem Siddiqi
Vision Interface, Montreal, Canada
2000

Divergence-Based Medial Surfaces
Sylvain Bouix, Kaleem Siddiqi
ECCV, Dublin, Ireland
2000

1999
References only

Multi-component apparent diffusion coefficients in human brain
R. V. Mulkern, H. Gudbjartsson, C.-F. Westin, H. P. Zengigonul, W. Gartner, C. R. G.Guttmann, R. Robertson, W. Kyriakos, R. Schwartz, D. Holtzman, F. A. Jolesz, S. E. Maier
NMR Biomedicine
1999

A Novel Error Criterion for Multi-Resolution Volume Data Compression
M. Martin, M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola
Proceedings of the IEEE First Joint Conference of the Biomedical Engineering Society and the Engineering in Medicine and Biology Society (BMES/EMBS'99), Atlanta, GA, USA
1999
Download full paper [PDF] © IEEE
Image Processing for Diffusion Tensor Magnetic Resonance Imaging
C.-F. Westin, S. E. Maier, B. Khidhir, P. Everett, F. A. Jolesz, R. Kikinis
Medical Image Computing and Computer-Assisted Intervention
1999
Download full paper [PDF] © Springer-Verlag
Fractional Segmentation of White Matter
S. K. Warfield, C.-F. Westin, C. R. G. Guttmann, M. Albert, F. A. Jolesz, R. Kikinis
Proceedings of MICCAI'99, Second International Conference on Medical Image Computing and Computer-Assisted Intervention, 1999
1999
© Springer-Verlag
Co-Dimension 2 Geodesic Active Contours for MRA Segmentation
L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, R. Keriven, R. Kikinis, C.-F. Westin
Int'l Conf. Information Processing in Medical Imaging (IPMI'99), Visegr\'ad, Hungary
1999
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The Hamilton-Jacobi Skeleton
Kaleem Siddiqi, Sylvain Bouix, Allen Tannenbaum, Steven W. Zucker
ICCV, Corfu, Greece
1999

Real Time Video Scene Detection and Classification
John M. Gauch, Susan Gauch, Sylvain Bouix, Xiaolan Zhu
Information processing and Management
1999

1998
References only

Magnetic Resonance Imaging Shows Orientation and Asymmetry of White Matter Tracts
S. Peled, H. Gudbjartsson, C.-F. Westin, R. Kikinis, F. A. Jolesz
Brain Research
1998
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Tensor Controlled Local Structure Enhancement of CT Images for Bone Segmentation
C.-F. Westin, S. Warfield, A. Bhalerao, L. Mui, J. Richolt, R. Kikinis
MICCAI
1998
© Springer-Verlag
High Performance Computing in Medical Image Analysis at the Surgical Planning Laboratory
R. Kikinis, S. K. Warfield, C.-F. Westin
High Performance Computing Asia'98, Singapore
1998

3D modelling of the chest in patients with implanted cardiac defibrillator for further bioelectrical simulation
J. Kettenbach, A. G. Schreyer, S. Okuda, M. D. Sweeney, S. Eisenberg, C.-F. Westin, F. Jacobson, R. Kikinis, B. H. KenKnight, F. A. Jolesz
Proceedings of Computer Assisted Radiology, Tokyom Japan
1998

VISION: Segmentation, Indexing and Retrieval of Digital Videos
Sylvain Bouix
1998

1997
References only

A DSP Implementation of Wavelet Transform to Detect Epileptiform Activity in the EEG
R. Hornero, M. Martin-Fernandez, A. Alonso, A. Izquierdo, M. Lopez
Proceedings of the Eighth Annual International Conference on Signal Processing Applications and Technology (ICAPAT'97), San Diego, CA, USA
1997
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Tissue classification based on 3D local intensity structures for volume rendering
Y. Sato, C.-F. Westin, A. Bhalerao, S. Nakajima, N. Shiraga, S. Yoshida, R. Kikinis
Proc. JAMIT Frontier '97, Suita, Japan
1997

Using Local 3D Structure for Segmentation of Bone from Computer Tomography Images
C.-F. Westin, A. Bhalerao, H. Knutsson, R. Kikinis
CVPR, Puerto Rico
1997
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Geometrical Diffusion Measures for MRI from Tensor Basis Analysis
C.-F. Westin, S. Peled, H. Gudbjartsson, R. Kikinis, F. A. Jolesz
ISMRM '97, Vancouver Canada
1997
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Unwrapping Phase in 3D MR Phase Contrast Angiograms
A. Bhalerao, C.-F. Westin, R. Kikinis
1st Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine and Medical Robotics and Computer-Assisted Surgery, CVRMED/MRCAS '97, Grenoble France
1997

1996
References only

Object Tracking Based on the Orientation Tensor Concept
J. Karlholm, C.-J. Westelius, C.-F. Westin, H. Knutsson
Theory and Applications of Image Analysis II
1996

Attention Control in Robot Vision
C.-F. Westin, C.-J. Westelius, H. Knutsson, G. H. Granlund
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR '96), San Francisco
1996

1995
References only

Tracking Based on the Orientation Tensor Concept
J. Karlholm, C.-J. Westelius, C.-F. Westin, H. Knutsson
Proceeding of 9th SCIA, Uppsala, Sweden
1995

Phase-based Disparity Estimation
C.-J. Westelius, H. Knutsson, J. Wiklund, C.-F. Westin
Vision as Process
1995

Line Extraction using Tensors
C.-F. Westin, H. Knutsson
Vision as Process
1995

Advanced Image Processing: Introduction and Background
C.-F. Westin, G. Granlund, H. Knutsson
Vision as Process
1995

Object Tracking Based on the Orientation Tensor Concept
J. Karlholm, C.-J. Westelius, C.-F. Westin, H. Knutsson
Proceedings of the 9th Scandinavian Conference on Image Analysis, Uppsala, Sweden
1995

1994
References only

Prototyping, Visualization and Simulation Using the Application Visualization System
C.-J. Westelius, J. Wiklund, C.-F. Westin
Experimental Environments for Computer Vision and Image Processing
1994

Object Tracking Based on the Orientation Tensor Concept
J. Karlholm, C.-J. Westelius, C.-F. Westin, H. Knutsson
Report LiTH-ISY-R-1658, Computer Vision Laboratory
1994

A Tensor Framework for Multidimensional Signal Processing
C.-F. Westin
PhD Dissertation
Linkping University, Sweden
1994
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Local Multiscale Frequency and Bandwidth Estimation
H. Knutsson, C.-F. Westin, G. H. Granlund
IEEE International Conference on Image Processing (ICIP'94), Austin, Texas
1994

Processing Incomplete and Uncertain Data using Subspace Methods
C.-F. Westin, H. Knutsson
Proceedings of 12th International Conference on Pattern Recognition, Jerusalem,Israel
1994

ESPRIT Basic Research Action 7108, Vision as Process, DR.B.2: Integration of Multi-level Control Loops and FOA
C.-F. Westin, C.-J. Westelius, J. Wiklund, H. Knutsson, G. Granlund
Report, Computer Vision Laboratory
1994

Estimation of Motion Vector Fields using Tensor Field Filtering
C.-F. Westin, H. Knutsson
Proceedings of IEEE International Conference on Image Processing (ICIP'94), Austin, Texas
1994

On the Equivalence of Normalized Convolution and Normalized Differential Convolution
C.-F. Westin, K. Nordberg, H. Knutsson
Proceedings of IEEE International Conference on Acoustics, Speech, & Signal Processing (ICASSP'94), Adelaide, Australia
1994

Processing Incomplete and Uncertain Data using Subspace Methods
C.-F. Westin, H. Knutsson
Proceedings of 12th International Conference on Pattern Recognition (ICPR'94), Jerusalem, Israel
1994

1993
References only

ESPRIT Basic Research Action 7108, Vision as Process, DR.B.1: Integration of Low-level FOA & Control Mechanisms
C.-F. Westin, C.-J. Westelius
Report, Computer Vision Laboratory
1993

AVS, Application Visualization System, Software Evaluation Report
J. Wiklund, C.-F. Westin, C.-J. Westelius
Report LiTH-ISY-R-1469, Computer Vision Laboratory
1993

Normalized and Differential Convolution: Methods for Interpolation and Filtering of Incomplete and Uncertain data
H. Knutsson, C.-F. Westin
Proceedings of Computer Vision and Pattern Recognition (CVPR'93), New York City, USA
1993
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Normalized Convolution: A Technique for Filtering Incomplete and Uncertain Data
H. Knutsson, C.-F. Westin
Proceedings of the 8th Scandinavian Conference on Image Analysis, Troms, Norway
1993

1992
References only

ESPRIT Basic Research Action 3038, Vision as Process, DR.A.2.1: Model Support and Local FOA Control
C.-F. Westin
Report, Computer Vision Laboratory
1992

Extraction of Local Symmetries using Tensor Field Filtering
C.-F. Westin, H. Knutsson
Proceedings of 2nd Singapore International Conference on Image Processing
1992

The Mbius Strip Parameterization for Line Extraction
C.-F. Westin, H. Knutsson
In Proceedings of Second European Conference on Computer Vision ECCV'92, Santa Margherita Ligure, Italy
1992

1991
References only

Line Segmentation by Clustering in Mbius-Hough Space
C.-F. Westin, H. Knutsson
Report LiTH-ISY-I-1221, Computer Vision Laboratory
1991

Feature Extraction Based on a Tensor Image Description
C.-F. Westin
Lic Thesis
Linkping University
1991

The Mbius Strip Parameterization for Line Segmentation
C.-F. Westin, H. Knutsson
Proceedings of the SSAB Symposium on Image Analysis, Stockholm
1991

ESPRI Basic Research Action 3038, Vision as Process, DR.A.1.2: Definition of feature generating procedures
C.-F. Westin, H. Knutsson
Report, Computer Vision Laboratory
1991

1990
References only

A Parameter Mapping for Line Segmentation
C.-F. Westin, H. Knutsson
Report LiTH-ISY-I-1151, Computer Vision Laboratory
1990

1989
References only

A Colour Representation for Scale-spaces
C.-J. Westelius, C.-F. Westin
Proceedings of 6th SCIA, Oulu, Finland
1989

Brain chaos. A feature or a bug?
C.-F. Westin, C.-J. Westelius
Report LiTH-ISY-I-0990, Computer Vision Laboratory
1989

1988
References only

A Colour Model for Hierarchical Image Processing
C.-F. Westin
1988