LMI : Publications : All Publications

All Publications


References only

2013 2012 2011 2010 2009 2008 2007 2006 2005 2004 2003 2002 2001 2000 1999 1998 1997 1996 1995 1994 1993 1992 1991 1990 1989 1988


2013
References only

Geometrical constraints for robust tractography selection
Rodrigo de Luis-Garcia, Carl-Fredrik Westin, Carlos Alberola-Lopez
NeuroImage
2013


A Method for z-shim Compensated EPI-BOLD imaging in a single shot
W. Scott Hoge, Robert A. Kraft, Emily Stern, Hong Pan
Proc of 2013 IEEE Intl Symp on Biomedical Imaging (ISBI 2013), San Francisco, CA
2013
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Charged Containers for Optimal 3D Q-space Sampling
Hans Knutsson, Carl-Fredrik Westin
Proceedings of the International Society for Magnetic Resonance in Medicine annual meeting (ISMRM'13)
2013


Tensor Metrics and Charged Containers for 3D Q-space Sample Distribution
Hans Knutsson, Carl-Fredrik Westin
2013


Fiber clustering versus the parcellation-based connectome
Lauren J. O'Donnell, Alexandra J. Golby, Carl-Fredrik Westin
NeuroImage
2013


Diffusion Propagator Estimation from Sparse Measurements in a Tractography Framework
Yogesh Rathi, Borjan Gagoski, Kawin Setsompop, Oleg Michailovich, P. Ellen Grant, Carl-Fredrik Westin
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2013
2013


Diffusion Imaging based on Markers of Abnormal Brain Tissue
Yogesh Rathi, Martha Shenton, Carl-Fredrik Westin
Quantitative Medical Imaging
2013


Computed tomographic measures of pulmonary vascular morphology in smokers and their clinical implications.
Ra\'ul San José Estépar, Gregory L. Kinney, Jennifer L. Black-Shinn, Russell P. Bowler, Gordon L. Kindlmann, James C. Ross, Ron Kikinis, MeiLan K. Han, Carolyn E. Come, Alejandro A. Diaz, Michael H. Cho, Craig P. Hersh, Joyce D. Schroeder, John J. Reilly, David A. Lynch, James D. Crapo, J. Michael Wells, Mark T. Dransfield, John E. Hokanson, George R. Washko, COPDGene Study
American journal of respiratory and critical care medicine
2013


Sexually Dimorphic White Matter Geometry Abnormalities in Adolescent Onset Schizophrenia.
P. Savadjiev, T. J. Whitford, M. E. Hough, C. Clemm von Hohenberg, S. Bouix, C. F. Westin, M. E. Shenton, T. J. Crow, A. C. James, M. Kubicki
Cerebral cortex (New York, N.Y. : 1991)
2013


Combining Surface and Fiber Geometry: An Integrated Approach to Brain Morphology
Peter Savadjiev, Yogesh Rathi, Sylvain Bouix, Alex R. Smith, Robert T. Schultz, Ragini Verma, Carl-Fredrik Westin
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2013
2013


Diffusion tensor image registration using polynomial expansion.
Yuanjun Wang, Zengai Chen, Shengdong Nie, Carl-Fredrik Westin
Physics in medicine and biology
2013


Diffeomorphic point set registration using non-stationary mixture models
D. Wassermann, J. Ross, G. Washko, C. F. Westin, R. San Jose Estepar
2013 IEEE 10th International Symposium on Biomedical Imaging (ISBI 2013)
2013


Monomial Phase: A Matrix Representation of Local Phase
Hans Knutsson, Carl-Fredrik Westin
Visualization and Processing of Tensors and Higher Order Descriptors for Multi-Valued Data
2013


Diffusion tensors from double-PFG of the human brain
CF. Westin, M. Nilsson, O. Pasternak, H. Knutsson
Proceedings of the ISMRM
2013


On Describing Human White Matter Anatomy: The White Matter Query Language
Demian Wassermann, Nikos Makris, Yogesh Rathi, Martha Shenton, Ron Kikinis, Marek Kubicki, Carl-Fredrik Westin
Medical Image Computing and Computer-Assisted Intervention--MICCAI 2013
2013


2012
References only

Excessive extracellular volume reveals a neurodegenerative pattern in schizophrenia onset
Ofer Pasternak, Carl-Fredrik Westin, Sylvain Bouix, Larry J. Seidman, Jill M. Goldstein, Tsung-Ung W. Woo, Tracey L. Petryshen, Raquelle I. Mesholam-Gately, Robert W. McCarley, Ron Kikinis, others
The Journal of Neuroscience
2012


Extended Broca's area in the functional connectome of language in adults: combined cortical and subcortical single-subject analysis using fMRI and DTI tractography
Jean-Jacques Lemaire, Alexandra Golby, William M. Wells III, Sonia Pujol, Yanmei Tie, Laura Rigolo, Alexander Yarmarkovich, Steve Pieper, Carl-Fredrik Westin, Ferenc Jolesz, others
Brain Topography
2012


Optimal real-time estimation in diffusion tensor imaging
Pablo Casaseca-de-la-Higuera, Antonio Tristan-Vega, Santiago Aja-Fernandez, Carlos Alberola-Lopez, Carl-Fredrik Westin, Raul San Jose Estepar
Magnetic Resonance Imaging
2012


Lung deflation and oxygen pulse in COPD: results from the NETT randomized trial.
Carolyn E. Come, Miguel J. Divo, Raul San Jose Estepar, Frank C. Sciurba, Gerard J. Criner, Nathaniel Marchetti, Steven M. Scharf, Zab Mosenifar, Barry J. Make, Cesar A. Keller, Omar A. Minai, Fernando J. Martinez, MeiLan K. Han, John J. Reilly, Bartolome R. Celli, George R. Washko, NETT. Research Group
Respiratory medicine
2012
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Association Between Airway Caliber Changes With Lung Inflation and Emphysema Assessed by Volumetric CT Scan in Subjects With COPD.
Alejandro A. Diaz, Carolyn E. Come, James C. Ross, Raul San Jose Estepar, MeiLan K. Han, Stephen H. Loring, Edwin K. Silverman, George R. Washko, for the COPDGene Investigators
Chest
2012
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Unbiased groupwise registration of white matter tractography
Lauren O'Donnell, William Wells, Alexandra Golby, Carl-Fredrik Westin
Int Conf Med Image Comput Comput Assist Interv. MICCAI 2012
2012


Estimation of Extracellular Volume from Regularized Multi-Shell Diffusion MRI
Ofer Pasternak, Martha Shenton, Carl-Fredrik Westin
Int Conf Med Image Comput Comput Assist Interv. MICCAI 2012
2012


Anterior limb of the internal capsule in schizophrenia: a diffusion tensor tractography study
Gudrun Rosenberger, Paul Nestor, Jungsu Oh, James Levitt, Gordon Kindleman, Slylvain Bouix, Jennifer Fitzsimmons, Margaret Niznikiewicz, Carl-Fredrik Westin, Ron Kikinis, Robert McCarley, Martha Shenton, Marek Kubicki
Brain Imaging and Behavior
2012
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Multi-scale characterization of white matter tract geometry
Peter Savadjiev, Yogesh Rathi, Sylvain Bouix, Martha Shenton, Carl-Fredrik Westin
Int Conf Med Image Comput Comput Assist Interv. MICCAI 2012
2012


Magnetic Resonance Imaging by Synergistic Diffusion-Diffraction Patterns
Noam Shemesh, Carl-Fredrik Westin, Yoram Cohen
Phys. Rev. Lett.
2012
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A review of magnetic resonance imaging and diffusion tensor imaging findings in mild traumatic brain injury
Martha Shenton, H. M. Hamoda, Jason S. Schneiderman, Sylvain Bouix, Ofer Pasternak, Yogesh Rathi, M. A. Vu, M.P. Purohit, Karl Helmer, Inga Koerte, A. P. Lin, Carl-Fredrik Westin, Ron Kikinis, Marek Kubicki, Robert A. Stern, Ross Zafonte
Brain Imaging and Behavior
2012


Efficient and robust nonlocal means denoising of MR data based on salient features matching
Antonio Tristan-Vega, Veronica Garcia-Perez, Santiago Aja-Fernandez, Carl-Fredrik Westin
Computer Methods and Programs in Biomedicine
2012
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Fast DSI Acquisition and Reconstruction Based on Sparse Diffusion Propagator Representations
Antonio Tristan-Vega, Carl-Fredrik Westin
Proceedings of the ISMRM Annual Meeting (ISMRM'12)
2012


Least squares for diffusion tensor estimation revisited: Propagation of uncertainty with Rician and non-Rician signals
Antonio Tristan-Vega, Santiago Aja-Fernandez, Carl-Fredrik Westin
NeuroImage
2012
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Whole brain resting state functional connectivity abnormalities in schizophrenia.
Archana Venkataraman, Thomas J. Whitford, Carl-Fredrik Westin, Polina Golland, Marek Kubicki
Schizophrenia research
2012


Joint modeling of anatomical and functional connectivity for population studies.
Archana Venkataraman, Yogesh Rathi, Marek Kubicki, Carl-Fredrik Westin, Polina Golland
IEEE transactions on medical imaging
2012
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In-vivo angular double-PFG MRI of the human brain
Carl-Fredrik Westin, Markus Nilsson, Ofer Pasternak, Daniel Topgaard, Hans Knutsson
Proceedings of the ISMRM Annual Meeting (ISMRM'12)
2012


Rotationally invariant gradient schemes for diffusion MRI
Carl-Fredrik Westin, Ofer Pasternak, Hans Knutsson
Proceedings of the ISMRM Annual Meeting (ISMRM'12)
2012


Statins and Pulmonary Fibrosis: The Potential Role of NLRP3 Inflammasome Activation
J. F. Xu, G. R. Washko, K. Nakahira, H. Hatabu, A. S. Patel, I. E. Fernandez, M. Nishino, Y. Okajima, T. Yamashiro, J. C. Ross, Raul San Jose Estepar, A. A. Diaz, H. P. Li, J. M. Qu, B. E. Himes, C. E. Come, K. D'Aco, F. J. Martinez, M. K. Han, D. A. Lynch, J. D. Crapo, D. Morse, S. W. Ryter, E. K. Silverman, I. O. Rosas, A. M. K. Choi, G. M. Hunninghake
American journal of respiratory and critical care medicine
2012
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fMRI-DTI modeling via landmark distance atlases for prediction and detection of fiber tracts
Lauren J. O'Donnell, Laura Rigolo, Isaiah Norton, William M. Wells III, Carl-Fredrik Westin, Alexandra J. Golby
NeuroImage
2012
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2011
References only

A swarm tracking approach for stochastic white matter tractography
Yuanjing Feng, Peter Savadjiev, Yogesh Rathi, Meina Quan, Zhejin Wang, Carl-Fredrik Westin
ISBI
2011


Improving Registration Using Multi-channel Diffeomorphic Demons Combined with Certainty Maps
Daniel Forsberg, Yogesh Rathi, Sylvain Bouix, Demian Wassermann, Hans Knutsson, Carl-Fredrik Westin
Multimodal Brain Image Analysis, First International Workshop, MBIA 2011
2011
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Gender Differences of Airway Dimensions in Anatomically Matched Sites on CT in Smokers
Yu-Il Kim, Joyce Schroeder, David Lynch, John Newell, Barry Make, Adam Friedlander, Raul San Jose Estepar, Nicola A. Hanania, George Washko, James R. Murphy, Carla Wilson, John E. Hokanson, Jordan Zach, Kiel Butterfield, Russell P. Bowler, COPDGene Investigators
COPD
2011


Structure Tensor Estimation - Introducing Monomial Quadrature Filter Sets
H. Knutsson, C-F. Westin, M. Andersson
New Developments in the Visualization and Processing of Tensor Fields, Dagstuhl 2009
2011
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Representing local structure using tensors II
Hans Knutsson, Carl-Fredrik Westin, Mats Andersson
Proceedings of the 17th Scandinavian conference on Image analysis, Berlin, Heidelberg
2011
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Stochastic tractography study of Inferior Frontal Gyrus anatomical connectivity in schizophrenia
Marek Kubicki, Jorge L. Alvarado, Carl-Fredrik Westin, David F. Tate, Douglas Markant, Douglas P. Terry, Thomas J. Whitford, Julien De Siebenthal, Sylvain Bouix, Robert W. McCarley, Ron Kikinis, Martha E. Shenton
NeuroImage
2011
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Gaussian mixtures on tensor fields for segmentation: Applications to medical imaging
Rodrigo de Luis-Garcia, Carl-Fredrik Westin, Carlos Alberola-Lopez
Computerized Medical Imaging and Graphics
2011


Sparse Multi-shell Diffusion Imaging
Y. Rathi, O. Michailovich, K. Setsompop, S. Bouix, M.E. Shenton, C.-F. Westin

2011
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Statistical analysis of fiber bundles using multi-tensor tractography: application to first-episode schizophrenia
Yogesh Rathi, Marek Kubicki, Sylvain Bouix, Carl-Fredrik Westin, Jill Goldstein, Larry Seidman, Raquelle Mesholam-Gately, Robert W. McCarley, Martha E. Shenton
Magnetic Resonance Imaging
2011
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Probabilistic ODF Estimation from Reduced HARDI Data with Sparse Regularization
A. Tristan-Vega, C-F. Westin

2011
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Tractography segmentation using a hierarchical Dirichlet processes mixture model
Xiaogang Wang, W. Eric L. Grimson, Carl-Fredrik Westin
NeuroImage
2011
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White Matter Bundle Registration and Population Analysis Based on Gaussian Processes
D. Wassermann, Y. Rathi, S. Bouix, M. Kubicki, R. Kikinis, M.E. Shenton, C-F. Westin

2011
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Fiber geometry in the corpus callosum in schizophrenia: Evidence for transcallosal misconnection
Thomas J. Whitford, Peter Savadjiev, Marek Kubicki, Lauren J. O'Donnell, Douglas P. Terry, Sylvain Bouix, Carl-Fredrik Westin, Jason S. Schneiderman, Laurel Bobrow, Andrew C. Rausch, Margaret Niznikiewicz, Paul G. Nestor, Christos Pantelis, Stephen J. Wood, Robert W. McCarley, Martha E. Shenton
Schizophrenia Research
2011


Disrupted Axonal Fiber Connectivity in Schizophrenia
Andrew Zalesky, Alex Fornito, Marc L. Seal, Luca Cocchi, Carl-Fredrik Westin, Edward T. Bullmore, Gary F. Egan, Christos Pantelis
Biological Psychiatry
2011


2010
References only

Multi-affine Registration using Local Polynomial Expansion
Y-J. Wang, G. Farnebäck, C.-F. Westin
Journal of Zhejiang University
2010
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The role of a computed tomography-based image registered navigation system for natural orifice transluminal endoscopic surgery: a comparative study in a porcine model
Gloria Fern\'andez-Esparrach, Raul San Jose Estepar, Carlos Guarner-Argente, Graciela Mart\'inez-Pall\'i, R. Navarro, C. Rodr\'iguez de Miguel, Henry C\'ordova, Christopher C. Thompson, Antonio M. Lacy, Luis Donoso, JR. Ayuso-Colella, A. Ginés, M. Pellisé, J. Llach, Kirby G. Vosburgh
Endoscopy
2010
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Hidden Markov Model for Quantifying Clinician Expertise in Flexible Instrument Manipulation
Jagadeesan Jayender, Raul San Jose Estepar, Keith Obstein, Vaibhav Patil, Christopher C. Thompson, Kirby G. Vosburgh
Medical Imaging and Augmented Reality
2010
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New Kinematic Metric for Quantifying Surgical Skill for Flexible Instrument Manipulation
Jagadeesan Jayender, Raul San Jose Estepar, Kirby G. Vosburgh
Information Processing in Computer-Assisted Interventions (IPCAI 2010)
2010
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Corpus Callosum Abnormalities and their Association with Psychotic Symptoms in Patients with Schizophrenia
T. J. Whitford, M. Kubicki, J. S. Schneiderman, L. O'Donnell, R. King, J. L. Alvarado, U. Khan, D. Markant, P. G. Nestor, M. Niznikiewicz, R. W. McCarley, C.-F. Westin, M. E. Shenton
Biological Psychiatry
2010


The fiber laterality histogram: A new way to measure white matter asymmetry
Lauren O'Donnell, C.-F. Westin, Isaiah Norton Stephen Whalen, Laura Rigolo, Ruth Propper, Alexandra Golby
Med Image Comput and Comput Assis Interv
2010


Multi-Diffusion-Tensor Fitting via Spherical Deconvolution: A Unifying Framework
Thomas Schultz, C.-F. Westin, Gordon Kindlmann
Med Image Comput and Comput Assis Interv
2010


Automatic Lung Lobe Segmentation Using Particles, Thin Plate Splines, and Maximum a Posteriori Estimation
James C. Ross, Raul San Jose Estepar, Gordon Kindlmann, Alejandro Diaz, Carl-Fredrik Westin, Edwin K. Silverman, George R. Washko
Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2010
2010
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Joint Generative Model for fMRI/DWI and its Application to Population Studies
Archana Venkataraman, Yogesh Rathi, Marek Kubicki, Carl-Fredrik Westin, Polina Golland
Medical Image Computing and Computer-Assisted Intervention, MICCAI 2010
2010


A geometry-based particle filtering approach to white matter tractography
Peter Savadjiev, Yogesh Rathi, James Malcolm, Martha Shenton, C.-F. Westin
Medical Image Computing and Computer-Assisted Intervention, MICCAI 2010
2010
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Biomarkers for identifying first-episode schizophrenia patients using diffusion weighted imaging
Yogesh Rathi, James Malcolm, Oleg Michailovich, Robert W. McCarley, C.-F. Westin, Martha Shenton
Medical Image Computing and Computer-Assisted Intervention, MICCAI 2010
2010


Disease Classification: A Probabilistic Approach
Yogesh Rathi, James Malcolm, Sylvain Bouix, Robert W. McCarley, Larry Seidman, Jill Goldstein, C.-F. Westin, Martha Shenton
Proc. of the 7th International Symposium on Biomedical Images: From Nano to Macro (ISBI), Rotterdam, Netherlands
2010
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Tensor Kernels for Simultaneous Fiber Model Estimation and Tractography
Y. Rathi, J. G. Malcolm, O. Michailovich, C.-F. Westin, M. E. Shenton, S. Bouix
Magn Reson Med
2010


Local White Matter Geometry from Diffusion Tensor Gradients
P. Savadjiev, G. Kindlmann, S. Bouix, M. E. Shenton, C.-F. Westin
Neuroimage
2010
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Image Registered Natural Orifices Transluminal Endoscopy Surgery (IR NOTES): System design and initial experiments
Raul San Jose Estepar, Gloria Fern\'andez-Esparrach, Carlos Guarner-Argente, Henry C\'ordova, Antonio M. Lacy, C.C. Thompson, Kirby G. Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2010
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Treating Disease in the Abdomen: Can Registered Image Guidance Assist the Gastroenterologist and Abdominal Surgeon?
Kirby G. Vosburgh, Raul San Jose Estepar
International Journal of Computer Assisted Radiology and Surgery
2010
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Airway Count and Emphysema Assessed by Chest CT Imaging Predicts Clinical Outcome in Smokers
Alejandro A. Diaz, Clarissa Valim, Tsuneo Yamashiro, Raul San Jose Estepar, James C. Ross, Shin Matsuoka, Brian Bartholmai, Hiroto Hatabu, Edwin K. Silverman, George R. Washko
Chest
2010
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Relationship of emphysema and airway disease assessed by CT to exercise capacity in COPD
Alejandro A. Diaz, Brian Bartholmai, Raul San Jose Estepar, James Ross, Shin Matsuoka, Tsuneo Yamashiro, Hiroto Hatabu, John J. Reilly, Edwin K. Silverman, George R. Washko
Respiratory Medicine
2010
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Quantitative Assessment of Bronchial Wall Attenuation on Thin-Section CT: an Indicator of Airflow Limitation in Chronic Obstructive Pulmonary Disease
Tsuneo Yamashiro, Shin Matsuoka, Raul San Jose Estepar, Mark T. Dransfield, John J. Reilly, Hiroto Hatabu, George R. Washko
American Journal of Roentgenology
2010
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Collapsibility of Lung Volume by Paired Inspiratory and Expiratory CT Scans: Correlations with Lung Function and Mean Lung Density
Tsuneo Yamashiro, Shin Matsuoka, Brian J. Bartholmai, Raul San Jose Estepar, James C. Ross, Alejandro Diaz, Sadayuki Murayama, Edwin K. Silverman, Hiroto Hatabu, George R. Washko
Academic Radiology
2010
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A filtered approach to neural tractography using the Watson directional function
J. Malcolm, O. Michailovich, S. Bouix, C.-F. Westin, M. E. Shenton, Y. Rathi
Med Image Anal
2010
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Physiologic and Computed Tomographic Predictors of Outcome from Lung Volume Reduction Surgery
George R. Washko, Fernando J. Martinez, Eric A. Hoffman, Stephen H. Loring, Raul San Jose Estepar, Alejandro Diaz, Frank C. Sciurba, Edwin K. Silverman, MeiLan Han, Malcolm DeCamp, John J. Reilly, NETT. Research Group
American Journal of Respiratory and Critical Care Medicine
2010
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Pulmonary Hypertension and Computed Tomography Measurement of Small Pulmonary Vessels in Severe Emphysema
Shin Matsuoka, George R. Washko, Tsuneo Yamashiro, Raul San Jose Estepar, Alejandro Diaz, Edwin K. Silverman, Eric Hoffman, Henry E. Fessler, Gerard J. Criner, Nathaniel Marchetti, Steven M. Scharf, Fernando J. Martinez, John J. Reilly, Hiroto Hatabu for the National Emphysema Treatement Trial Research Group
American Journal of Respiratory and Critical Care Medicine
2010
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Quantitative CT Measurement of Cross-sectional Area of Small Pulmonary Vessel in COPD: Correlations with Emphysema and Airflow Limitation
Shin Matsuoka, George R. Washko, Mark T. Dransfield, Tsuneo Yamashiro, Raul San Jose Estepar, Alejandro Diaz, Edwin K. Silverman, Samuel Patz, Hiroto Hatabu
Academic Radiology
2010
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Identification of Early Interstitial Lung Disease in Smokers from the COPDGene Study
George R. Washko, David A. Lynch, Shin Matsuoka, James C. Ross, Shigeaki Umeoka, Alejandro Diaz, Frank C. Sciurba, Gary M. Hunninghake, Raul San Jose Estepar, Edwin K. Silverman, Ivan O. Rosas, Hiroto Hatabu
Academic Radiology
2010
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A new methodology for the estimation of fiber populations in the white matter of the brain with the Funk-Radon transform
Antonio Tristan-Vega, C.-F. Westin, Santiago Aja-Fernandez
NeuroImage
2010
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2009
References only

Sequential anisotropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data
M. Martin-Fernandez, E. Munoz-Moreno, J. P. Thiran, C.-F. Westin, C. Alberola
Medical Image Analysis
2009
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Thalamo-frontal white matter alterations in chronic schizophrenia: a quantitative diffusion tractography study
J. Oh, M. Kubicki, G. Rosenberger, S. Bouix, J. Levitt, R. McCarley, C.-F. Westin, M. E. Shenton
Hum Brain Mapp
2009
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Uncinate fasciculus abnormalities in recent onset schizophrenia and affective psychosis: A diffusion tensor imaging study
T. Kawashima, M. Nakamura, S. Bouix, M. Kubicki, D. Salisbury, C.-F. Westin, R. McCarley, M. E. Shenton
Schizophr Res
2009
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Consistency Clustering: A Robust Algorithm for Group-wise Registration, Segmentation and Automatic Atlas Construction in Diffusion MRI
Ulas Ziyan, Mert R. Sabuncu, W. Eric Grimson, C.-F. Westin
Int Journal Comput Vis
2009
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Local White Matter Geometry Indices from Diffusion Tensor Gradients
Peter Savadjiev, Gordon L. Kindlmann, Sylvain Bouix, Martha E. Shenton, C.-F. Westin

2009
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Lung Extraction, Lobe Segmentation and Hierarchical Region Assessment for Quantitative Analysis on High Resolution Computed Tomography Images
James C. Ross, Raul San Jose Estepar, Alejandro D\'\iaz, C.-F. Westin, Ron Kikinis, Edwin K. Silverman, George R. Washko
Medical Image Computing and Computer-Assisted Intervention -- MICCAI 2009
2009
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Intraoperative Ultrasound Probe Calibration in a Sterile Environment
Ramtin Shams, Raul San Jose Estepar, Vaibhav Patil, Kirby G. Vosburgh
Medical Image Computing and Computer-Assisted Intervention (MICCAI) 5th workshop on Augmented Environments for Medical Imaging and Computer-aided Surgery (AMI-ARCS), London, UK
2009
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Quantitative airway assessment on computed tomography in patients with alpha1-antitrypsin deficiency
Tsuneo Yamashiro, Shin Matsuoka, Raul San Jose Estepar, Alejandro Diaz, John Newell, Robert A. Sandhaus, Patricia Mergo, Mark L. Brantly, Sadayuki Murayama, John J. Reilly, Hiroto Hatabu, Edwin K. Silverman, George R. Washko
COPD:Journal of Chronic Obstructive Pulmonary Disease
2009
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Sampling and Visualizing Creases with Scale-Space Particles
Gordon L. Kindlmann, Raul San Jose Estepar, Stephen M. Smith, C.-F. Westin
IEEE Trans. Visualization and Computer Graphics
2009
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COPDGene Study Quality Assurance Phantom
Phil Judy, Raul San Jose Estepar, Eric Hoffman, David Lynch, (for the COPDGene investigators)
Medical Physics
2009


Increased diffusivity in superior temporal gyrus in patients with schizophrenia: A Diffusion Tensor Imaging study
K. Lee, T. Yoshida, M. Kubicki, S. Bouix, C.-F. Westin, G. Kindlemann, M. Niznikiewicz, A. Cohen, R. McCarley, M. E. Shenton
Schizophrenia Research
2009
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A MRI study of relative organ position in the upper abdomen for changes in patient orientation: application to image-registered endoscopic ultrasound
Raul San Jose Estepar, Bruno Madore, Mark Yarmarkovich, Kirby G. Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2009
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Dynamic CT scanner environment effects on a DC electromagnetic tracking system
Vaibhav Patil, Raul San Jose Estepar, Connor J. Walsh, Kirby G. Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2009
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Study of Language-Related White Matter Tract Connections in Schizophrenia using Diffusion Stochastic Tractography
J. Alvarado, D. Terry, D. Markant, T. Ngo, R. Kikinis, C.-F. Westin, R. McCarley, ME. Shenton, M. Kubicki

2009
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White Matter Properties of Emotion Related Connections in Schizophrenia
D. Terry, A. Rausch, J. Avarado, J. Melonakos, D. Markant, C.-F. Westin, R. Kikinis, J. Siebenthal, ME. Shenton, M. Kubicki

2009
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Sequential anistropic multichannel Wiener filtering with Rician bias correction applied to 3D regularization of DWI data
Marcos Martin-Fernandez, E. Munoz-Moreno, L. Cammoun, J-P. Thiran, C. Alberola-Lopez, C.-F. Westin
Med Image Analysis
2009
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Estimation of fiber Orientation Probability Density Functions in High Angular Resolution Diffusion Imaging
Antonio Tristan-Vega, C.-F. Westin, Santiago Aja-Fernandez
NeuroImage
2009
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Tract-based morphometry for white matter group analysis
Lauren O'Donnell, Alexandra J. Golby, C.-F. Westin
NeuroImage
2009
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Uncinate fasciculus abnormalities in recent onset schizophrenia and affective psychosis: A diffusion tensor imaging study
T. Kawashima, M. Nakamura, S. Bouix, M. Kubicki, D. Salisbury, C.-F. Westin, R. W. McCarley, M. E. Shenton
Schizophrenia Research
2009
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Towards real time 2D to 3D registration for ultrasound-guided endoscopic and laparoscopic procedures
Raul San Jose Estepar, C.-F. Westin, Kirby Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2009
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Airway Wall Attenuation: A Biomarker of Airway Disease in Subjects with COPD
George R. Washko, Mark T. Dransfield, Raul San Jose Estepar, Alejandro Diaz, Shin Matsuoka, Tsuneo Yamashiro, Hiroto Hatabu, Edwin K. Silverman, William C. Bailey, John J. Reilly
Journal of Applied Physiology
2009
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CT Metrics of Airway Disease and Emphysema in Severe COPD
Woo Jin Kim, Edwin K. Silverman, Eric Hoffman, Gerald J. Criner, Zab Mosenifar, Frank C. Sciurba, Barry J. Make, Vincent Carey, Raul San Jose Estepar, Alejandro Diaz, John J. Reilly, Fernando J. Martinez, George R. Washko
Chest
2009
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Diffusion tractography of the fornix in schizophrenia
J. Fitzsimmons, M. Kubicki, K. Smith, G. Bushell, R. San Jose Estepar, C.-F. Westin, P.G. Nestor, M.A. Niznikiewicz, R. Kikinis, R.W. McCarley, M.E. Shenton
Schizophrenia Research
2009
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Quantitative examination of a novel clustering method using magnetic resonance diffusion tensor tractography
A. N. Voineskos, L. J. O'Donnell, N. J. Lobaugh, D. Markant, S. H. Ameis, M. Niethammer, B. H. Mulsant, B. G. Pollock BG, J. L. Kennedy, C.-F. Westin, M. E. Shenton
NeuroImage
2009
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2008
References only

Unifying Statistical Classification and Geodesic Active Regions for Segmentation of Cardiac MRI
Jenny Folkesson, Eigil Samset, R. Y. Kwong, Carl-Fredrik Westin
IEEE Transactions on Information Technology in Biomedicine
2008


Fornix in First Episode Schizophrenia: A Diffusion Tractography Study
J. Fitsimmons, K. Smith, M. Kubicki, R. San-Jose, C.-F. Westin, DF. Salisbury, R. Kikinis, R. McCarley, ME. Shenton

2008
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Three-Dimensional Airway Measurements and Algorithms
Raul San Jose Estepar, John J. Reilly, Edwin K. Silverman, George R. Washko
Proceedings of the American Thoracic Society
2008
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Invariant Crease Lines for Topological and Structural Analysis of Tensor Fields
X. Tricoche, G. Kindlmann, C.-F. Westin
IEEE Transactions on Visualization and Computer Graphics
2008
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Resolving crossings in the corticospinal tract by two-tensor streamline tractography: method and clinical assessment using fMRI
Arish A. Qazi, Alireza Radmanesh, Lauren O'Donnell, Gordon Kindlmann, Sharon Peled, Stephen Whalen, C.-F. Westin, Alexandra J. Golby
Neuroimage
2008
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Real time 2D to 3D registration for ultrasound-guided endoscopic procedures
Raul San Jose Estepar, C.-F. Westin, Kirby G. Vosburgh
International Journal of Computer Assisted Radiology and Surgery
2008
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Joint Segmentation of Thalamic Nuclei from a Population of Diffusion Tensor MR Images
U. Ziyan, C.-F. Westin
Eleventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '08)
2008
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Quantification of white matter fiber orientation at tumor margins with diffusion tensor invariant gradients
G. Kindlmann, S. Whalen, R. Suarez, A. Golby, C.-F. Westin
Proceedings of the ISMRM Annual Meeting (ISMRM'08)
2008


Airway Inspector: An Open Source Application for Lung Morphometry
Raul San Jose Estepar, George G. Washko, Edwin K. Silverman, John J. Reilly, Ron Kikinis, C.-F. Westin
First International Workshop on Pulmonary Image Processing, New York City, USA
2008
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A Mathematical Framework for Incorporating Anatomical Knowledge in DT-MRI analysis
Mahnaz Maddah, Lilla Zöllei, W. Eric L. Grimson, C.-F. Westin, William M. Wells
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, Paris, France
2008
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Findings in Schizophrenia by Tract-Oriented DT-MRI Analysis
M. Maddah, M. Kubicki, W. Wells, C.-F. Westin, M. Shenton, W. Grimson
Eleventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2008
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Directional Functions for Orientation Distribution Estimation
Yogesh Rathi, Oleg Michailovich, Sylvain Bouix, Martha E. Shenton
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, Paris, France
2008


On approximation of orientation distributions by means of spherical ridgelets
Oleg Michailovich, Yogesh Rathi
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, Paris, France
2008
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Segmenting Images Analytically in Shape Space
Yogesh Rathi, Samuel Dambreville, Marc Neithammer, James Malcolm, James Levitt, Martha E. Shenton, Allen Tannenbaum
Biomedical Imaging: From Nano to Macro, 2008. ISBI 2008. 5th IEEE International Symposium on Biomedical Imaging, Paris, France
2008


Age-related deficits in fronto-temporal connections in schizophrenia: A diffusion tensor imaging study
G. Rosenberger, M. Kubicki, P. G. Nestor, E. Connor, G. Bushell, D. Markant, M. Niznikiewicz, C.-F. Westin, R. Kikinis, A. Saykin, R. McCarley, M. E. Shenton
Schizophr Res
2008
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Restoration of DWI data using a Rician LMMSE estimator
S. Aja-Fernandez, M. Niethammer, M. Kubicki, M. E. Shenton, C.-F. Westin
IEEE Trans Med Imaging
2008
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Image Registration Assists Novice Operators in Ultrasound Assessment of Abdominal Trauma
Kirby G. Vosburgh, Jeffrey Stoll, Vicki Noble, Kilian Pohl, Raul San Jose Estepar, Barnabas Takacs
Studies in Health Technology and Informatics
2008
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2007
References only

Tractography Segmentation Using a Hierarchical Dirichlet Processes Mixture Model
Xiaogang Wang, W. Eric L. Grimson, C.-F. Westin
Information Processing in Medical Imaging: 22th International Conference (IPMI 2007), Williamsburg, USA
2007


Spatially Varying Classification with Localization Certainty in Level Set Segmentation
Jenny Folkesson, Carl-Fredrik Westin
ICCV
2007


A review of diffusion tensor imaging studies in schizophrenia
Marek Kubicki, Robert McCarley, C.-F. Westin, Hae-Jeong Park, Stephan Maier, Ron Kikinis, Ferenc A. Jolesz, Martha E. Shenton
Journal of Psychiatric Research
2007
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White Matter Abnormalities in Whole Brain and its Regional Specificity in Chronic Schizophrenia: A Diffusion Tensor Imaging Study
M. Nakamura, U. Khan, M. Kubicki, S. Bouix, K. Quintus, G. Kindlmann, C.-F. Westin, R. Kinikins, M. Niznikiewicz, R. McCarley, ME. Shenton

2007
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Automatic Cluster Analysis of Corpus Callosum Subdivisions in Schizophrenia: A Diffusion Tensor Imaging Study
K. Smith, M. Kubicki, L. ODonell, C.-F. Westin, M. Niznikiewiz, R. McCarley, ME. Shenton

2007
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Diffusion Tractography of the Fornix in Male Schizophrenic Patients
J. Fitzsimmons, M. Kubicki, K. Smith, R. San Jose Estepar, C.-F. Westin, R. Kikinis, R. McCarley, ME. Shenton

2007
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Open-Source Environment for Interactive Finite Element Modeling of Optimal ICD Electrode Placement
Matthew Jolley, Jeroen Stinstra, David Weinstein, Steve Pieper, Raul San Jose Estepar, Gordon Kindlmann, Rob MacLeod, Dana H. Brooks, John K. Triedman
Functional Imaging and Modeling of the Heart
2007
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Local Structure Tensor for Multidimensional Signal Processing. Applications to Medical Image Analysis
Raul San Jose Estepar
2007
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Towards scarless surgery: An endoscopic ultrasound navigation system for transgastric access procedures
Raul San Jose Estepar, Nicholas Stylopoulos, Randy Ellis, Eigil Samset, Carl-Fredrik Westin, Christopher Thompson, Kirby Vosburgh
Computer Aided Surgery
2007
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Techniques in the Contour Detection of Kidneys and Their Applications
M. Martin-Fernandez, L. Cordero-Grande, E. Munoz-Moreno, C. Alberola-Lopez
Biomechanical Systems Technology. Volume 4: General Anatomy
2007
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A Spatial Model of White Matter Fiber Tracts
Mahnaz Maddah, William M. Wells, S.K. Warfield, Carl-Fredrik Westin, W. Eric L. Grimson
Proceedings of the ISMRM Annual Meeting (ISMRM'07)
2007
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Delineating white matter structure in diffusion tensor MRI with anisotropy creases
Gordon Kindlmann, Xavier Tricoche, Carl-Fredrik Westin
Medical Image Analysis
2007
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Diffusion Tensor Analysis with Invariant Gradients and Rotation Tangents
Gordon Kindlmann, Daniel B. Ennis, Ross T. Whitaker, Carl-Fredrik Westin
IEEE Transactions on Medical Imaging
2007
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Oriented Speckle Reducing Anisotropic Diffusion
Karl Krissian, Carl-Fredrik Westin, Ron Kikinis, Kirby Vosburgh
IEEE Trans Image Process. 2007
2007
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New Perspectives on the Sources of White Matter DTI Signal
Sharon Peled
IEEE Transactions on Medical Imaging
2007
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Automatic Tractography Segmentation Using a High-Dimensional White Matter Atlas
Lauren J. O'Donnell, Carl-Fredrik Westin
IEEE Transactions on Medical Imaging
2007
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Characterizing Diffusion Along White Matter Tracts Affected by Primary Brain Tumors
Monica E. Lemmond, Lauren J. O'Donnell, Stephen Whalen, Alexandra J. Golby
Human Brain Mapping 2007
2007
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Fast BlockMatching Registration with Entropy-based Similarity
Eduardo Suarez-Santana, Rafael Nebot, Carl-Fredrik Westin, Juan Ruiz-Alzola
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), Brisbane, Australia
2007
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Tract-Based Morphometry
Lauren J. O'Donnell, Carl-Fredrik Westin, Alexandra J. Golby
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07), Brisbane, Australia
2007
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Nonlinear Registration of Diffusion MR Images Based on Fiber Bundles
Ulas Ziyan, Mert R. Sabuncu, Lauren J. O'Donnell, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2007
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Hyperspherical von Mises-Fisher Mixture (HvMF) Modelling of High Angular Resolution Diffusion MRI
Abhir Bhalerao, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2007
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Outlier Rejection for Diffusion Weigthed Imaging
Marc Niethammer, Sylvain Bouix, Santiago Aja-Fernandez, Carl-Fredrik Westin, Martha E. Shenton
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2007
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Signal LMMSE Estimation from Multiple Samples in MRI and DT-MRI
Santiago Aja-Fernandez, Carlos Alberola-Lopez, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI '07)
2007
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Gender Differences in the Severity of CT Emphysema in COPD
Mark T. Dransfield, George R. Washko, Marilyn G. Foreman, Raul San Jose Estepar, John Reilly, William C. Bailey
Chest
2007
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Two-Tensor Fiber Tractography
Orjan Bergmann, Gordon Kindlmann, Sharon Peled, Carl-Fredrik Westin
Biomedical Imaging: From Nano to Macro, 2007. ISBI 2007. 4th IEEE International Symposium on Biomedical Imaging, Arlington, VA
2007
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Preliminary results of nonfluoroscopy-based 3D navigation for neurointerventional procedures
Sonia Pujol, Kai Frerichs, Alexander Norbash, Ron Kikinis, Carl-Fredrik Westin
J Vasc Interv Radiol
2007
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The uncinate fasciculus and extraversion in schizotypal personality disorder: a diffusion tensor imaging study
Ronald J. Gurrera, Motoaki Nakamura, Marek Kubicki, Chandlee C. Dickey, Margaret A. Niznikiewicz, Martina M. Voglmaier, Robert W. McCarley, Martha E. Shenton, Carl-Fredrik Westin, Stephan E. Maier, Larry J. Seidman
Schizophrenia Research
2007
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A Robust Algorithm for Fiber-Bundle Atlas Construction
Ulas Ziyan, Mert R. Sabuncu, W. Eric. L. Grimson, Carl-Fredrik Westin
Mathematical Methods in Biomedical Image Analysis (MMBIA 2007): 2007 IEEE Workshop
2007
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Probabilistic Clustering and Quantitative Analysis of White Matter Fiber Tracts
Mahnaz Maddah, William M. Wells III, Simon K. Warfield, Carl-Fredrik Westin, W. Eric L. Grimson
Information Processing in Medical Imaging: 20th International Conference (IPMI 2007), Kerkrade, The Netherlands
2007
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Geodesic-Loxodromes for Diffusion Tensor Interpolation and Difference Measurement
Gordon Kindlmann, Raul San Jose Estepar, Marc Niethammer, Steven Haker, Carl-Fredrik Westin
Tenth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'07), Brisbane, Australia
2007
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Natural Orifice Transluminal Endoscopic Surgery (NOTES): An Opportunity for Augmented Reality Guidance
Kirby G. Vosburgh, Raul San Jose Estepar
Studies in Health Technology and Informatics
2007
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EUS with CT improves efficiency and structure identification over conventional EUS
Kirby G. Vosburgh, Nicholas Stylopoulos, Raul San Jose Estepar, Randy E. Ellis, Eigil Samset, Christopher C. Thompson
Gastrointestinal Endoscopy
2007
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Interobserver Variability in the Determination of Upper Lobe-Predominant Emphysema
Craig P. Hersh, George R. Washko, Francine L. Jacobson, Ritu Gill, Raul San Jose Estepar, John J. Reilly, Edwin K. Silverman
Chest
2007
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On evaluating brain tissue classifiers without a ground truth
S. Bouix, M. Martin-Fernandez, L. Ungar, M. Nakamura M.-S. Koo, R. W. McCarley, M. E. Shenton
NeuroImage
2007
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Sequential Anisotropic Wiener Filtering Applied to 3D MRI Data
M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola, C.-F. Westin
Magnetic Resonance Imaging
2007
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Analysis of Ultrasound Images Based on Local Statistics. Application to the Diagnosis of Develpmental Dysplasia of the Hip
R. de-Luis-Garcia, S. Aja-Fernandez, R. Cardenez-Almeida, M. Martin-Fernandez, C. Alberola-Lopez
IEEE International Ultrasonics Symposium, New York, NY, USA
2007
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Parameter Estimation of the Homodyned K Distribution Based on Signal to Noise Ratio
M. Martin-Fernandez, R. Cardenes, C. Alberola-Lopez
IEEE International Ultrasonics Symposium, New York, NY, USA
2007
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UsimagTool: an Interactive Tool for Ultrasound Image Processing
R. Cardenes, A. Tristan, L. Cordero-Grande, E. Munoz-Moreno, M. Martin-Fernandez
IEEE Seventh International Symposium on BioInformatics and BioEngineering, Boston, MA, USA
2007
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Tissue Identification in Ultrasound Images using Rayleigh Local Parameter Estimation
S. Aja-Fernandez, M. Martin-Fernandez, C. Alberola-Lopez
IEEE Seventh International Symposium on BioInformatics and BioEngineering, Boston, MA, USA
2007
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Neural Network-Assisted Fiber Tracking of Synthetic and White Matter DT-MR Images
L. San-Jose-Revuelta, M. Martin-Fernandez, C. Alberola-Lopez
Lecture Notes in Engineering and Computer Science, World Congress on Engineering, London, UK
2007
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A New Proposal for 3D Fiber Tracking in Synthetic Diffusion Tensor Magnetic Resonance Images
L. San-Jose-Revuelta, M. Martin-Fernandez, C. Alberola-Lopez
IEEE International Symposium on Signal Processing and its Applications, Sharjah, United Arab Emirates
2007
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Comparison of fiber tracts derived from in-vivo DTI tractography with 3D histological neural tract tracer reconstruction on a macaque brain
Julien Dauguet, Sharon Peled, Vladimir Berezovskii, Thierry Delzescaux, Simon K. Warfield, Richard Born, Carl-Fredrik Westin
NeuroImage
2007
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Neocortical Gray Matter Volume in First Episode Schizophrenia and First Episode Affective Psychosis: A Cross-Sectional and Longitudinal MRI Study
M. Nakamura, DF. Salisbury, Y. Hirayasu, S. Bouix, KM. Pohl, T. Yoshida, MS. Koo, ME. Shenton, RW. McCarley
Biological Psychiatry
2007


A Hierarchical Algorithm for MR Brain Image Parcellation
K. M. Pohl, S. Bouix, M. Nakamura, T. Rohlfing, R. W. McCarley, R. Kikinis, W. E. L. Grimson, Shenton, W. M. Wells
IEEE Transa on Medical Imaging
2007


Using the Logarithm of Odds to Define a Vector Space on Probablistic Atlases
K. M. Pohl, S. Bouix, M. E. Shenton, R. W. McCarley, W. E. L. Grimson, R. Kikinis, W. M.
Medical Image Analysis Press
2007


Prediction from off-grid samples using continuous normalized convolution
Kenneth Andersson, Carl-Fredrik Westin, Hans Knutsson
Signal Processing
2007


Retrieving Articulated 3-D Models Using Medial Surfaces
K. Siddiqi, J. Zhang, D. Macrini, A. Shokoufandeh, S. Bouix, R. Chen, S. Dickinson
Machine Vision and Applications
2007


Partial Volume Effect Modelling in Cardiac MRI by means of Mixture of Gaussians
P. de-la-Viuda-Garcia, P. Casaseca-de-la-Higuera, L. Cordero-Grande, G. Vegas-Sanchez-Ferrero, M. Martin-Fernandez, C. Alberola-Lopez
Fiveteenth Annual Symposium of the Spanish Biomedical Engineering Society, Cartagena, Spain
2007
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2006
References only

Orthogonal Tensor Invariants and the Analysis of Diffusion Tensor Magnetic Resonance Images
Daniel B. Ennis, Gordon Kindlmann
Magnetic Resonance in Medicine
2006
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Characterizing the Shape of Anatomical Structures with Poisson's Equation
H. Haidar, S. Bouix, J. J. Levitt, R. W. McCarley, M. E. Shenton, J. S. Soul
IEEE Transactions on Medical Imaging
2006


Smaller Neocortical Gray Matter and Larger Sulcal CSF Volumes in Neuroleptic-Naive Females with Schizotypal Personality Disorder
M.S. Koo, C. C. Dickey, H.J. Park, M. Kubicki, N. Y. Ji, S. Bouix, K. M. Pohl, M. E. Shenton J. J. Levitt M. Nakamura, R. W. McCarley
Archives of General Psychiatry
2006


Fast Block Matching Registration with Entropy-based Similarity
Eduardo Suarez-Santana, Rafael Nebot, Carl-Fredrik Westin, Juan Ruiz-Alzola
2006
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Geometrically constrained two-tensor model for crossing tracts in DWI
Sharon Peled, Ola Friman, Ferenc Jolesz, Carl-Fredrik Westin
Magnetic Resonance Imaging
2006
Download full paper [PDF] © Elsevier

Diffusion Tensor Visualization with Glyph Packing
Gordon Kindlmann, Carl-Fredrik Westin
IEEE Transactions on Visualization and Computer Graphics (Proceedings Visualization / Information Visualization 2006)
2006
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Complementary aspects of diffusion imaging and fMRI; I: structure and function.
R. Mulkern, P. Davis, S. Haker, R. San Jose Estepar, L. Panych, S. Maier, M. Rivkin
Magnetic Resonance Imaging
2006
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Cerebral White Matter Analysis Using Diffusion Imaging
Lauren O'Donnell
PhD Dissertation
Massachusetts Institute of Technology
2006
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Anisotropy Creases Delineate White Matter Structure in Diffusion Tensor MRI
Gordon Kindlmann, Xavier Tricoche, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag

High-Dimensional White Matter Atlas Generation and Group Analysis
Lauren O'Donnell, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag

3D Histological Reconstruction of Fiber Tracts and Direct Comparison with Diffusion Tensor MRI Tractography
Julien Dauguet, Sharon Peled, Vladimir Berezovskii, Thierry Delzescaux, Simon K. Warfield, Richard Born, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag

Affine and Deformable Registration Based on Polynomial Expansion
Gunnar Farnebäck, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
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Segmentation of Thalamic Nuclei from DTI using Spectral Clustering
Ulas Ziyan, David Tuch, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag

Diffusion k-tensor estimation from Q-ball imaging using discretized principal axes
Ø. Bergmann, G. Kindlmann, A. Lundervold, C.-F. Westin
Nineth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag

Fiber Bundle Estimation and Parameterization
Marc Niethammer, Sylvain Bouix, Carl-Fredrik Westin, Martha E. Shenton
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag

Accurate Airway Wall Estimation Using Phase Congruency
Raul San Jose Estepar, George G. Washko, Edwin K. Silverman, John J. Reilly, Ron Kikinis, Carl-Fredrik Westin
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag

Towards Scarless Surgery: An Endoscopic-Ultrasound Navigation System for Transgastric Access Procedures
Raul San Jose Estepar, Nicholas Stylopoulos, Randy E. Ellis, Eigil Samset, Carl-Fredrik Westin, Chrisopsher Thompson, Kirby Vosburgh
Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'06), Copenhagen, Denmark
2006
Download full paper [PDF] © Springer-Verlag

Novel real time tracking interface improves the use of laparoscopic and endoscopic ultrasound in the abdomen
Kirby G. Vosburgh, Nicholas Stylopoulos, Christopher C. Thompson, Randy E. Ellis, Eigil Samset, Raul San Jose Estepar
International Journal of Computer Assisted Radiology and Surgery
2006
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On Diffusion Tensor Estimation
M. Niethammer, Raul San Jose Estepar, Sylvain Bouix, Martha Shenton, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
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A New Method for Fiber Tractography in Diffusion Tensor Magnetic Resonance Images
L. San-Jose-Revuelta, M. Martin-Fernandez, C. Alberola-Lopez
2006 IEEE International Conference on Signal and Image Processing - ICSIP 2006, Hubli, India
2006
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A Speckle Removal Filter based on an Anisotropic Wiener Filter and the Rice Distribution
M. Martin-Fernandez, E. Munoz-Moreno, C. Alberola-Lopez
2006 IEEE International Ultrasonics Symposium, Vancouver, Canada
2006
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SIMILAR Tensor Arrays -A Framework for Storage of Tensor Data
A. Brun, M. Martin-Fernandez, B. Acar, E. Munoz-Moreno, L. Cammoun, A. Sigfridsson, D. Sosa, B. Svensson, M. Herberthson, H. Knutsson
SIMILAR NoE Tensor Workshop, Las Palmas de Gran Canaria, Spain
2006
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Registration of DTI
E. Munoz-Moreno, E. Suarez-Santana, M. Martin-Fernandez
SIMILAR NoE Tensor Workshop, Las Palmas de Gran Canaria, Spain
2006
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User Interfaces to Interact with Tensor Fields. A State-of-the-Art Analysis
S. Merino-Caviedes, D. Lopez-Ibanez, J. Garcia-Avedillo, M. Martin-Fernandez
SIMILAR NoE Tensor Workshop, Las Palmas de Gran Canaria, Spain
2006
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Endocardium and Epicardium Contour Modeling Based on Markov Random Fields and Active Contours
L. Cordero-Grande, P. Casaseca-de-la-Higuera, M. Martin-Fernandez, C. Alberola-Lopez
28th Annual International Conference of IEEE Engineering in Medicine and Biology Society, EMBC-2006, New York City, NY, USA
2006
Download full paper [PDF] © IEEE

A Kernel-Based Approach for User-Guided Fiber Bundling using Diffusion Tensor Data
Raul San Jose Estepar, Marek Kubicki, Martha Shenton, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
Download full paper [PDF] © IEEE

Image Quality Assessment based on Local Variance
Santiago Aja-Fernandez, Raul San Jose Estepar, Carlos Alberola Lopez, C.-F. Westin
28th IEEE EMBS, New York City, NY, USA
2006
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Improving Deriche-style Recursive Gaussian Filters
Gunnar Farneback, Carl-Fredrik Westin
Journal of Mathematics in Imaging and Vision
2006
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A Bayesian Approach for Stochastic White Matter Tractography
Ola Friman, Gunnar Farneback, Carl-Fredrik Westin
TMI
2006
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A High-Dimensional Fiber Tract Atlas
L. O'Donnell, C.-F. Westin
Proceedings of the ISMRM Annual Meeting (ISMRM'06), Seattle, USA
2006
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A new strategy for respiration compensation, applied toward 3D free-breathing cardiac MR imaging
Bruno Madore, Gunnar Farneback, Carl-Fredrik Westin, Maria Alejandra Duran Mendicuti
MRI
2006
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A Method for Clustering White Matter Fiber Tracts
L. O'Donnell, Kubicki M, M. E. Shenton, M. Dreusicke, W. E. L. Grimson, C.-F. Westin
AJNR
2006
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Tensor Field Regularization Using Normalized Convolution and Markov Random Fields in a Bayesian Framework
C.-F. Westin, M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola, H. Knutsson
Visualization and Image Processing of Tensor Fields. Series: Mathematics and Visualization
2006
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Fornix integrity and hippocampal volume in male schizophrenic patients
N. Kuroki, M. Kubicki, P. G. Nestor D. F. Salisbury, H. J. Park, J. J. Levitt, S. Woolston, M. Frumin, M. Niznikiewicz, C.-F. Westin, S. E. Maier, R. McCarley, M. E. Shenton
Biol Psychiatry
2006
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Fornix Integrity and Hippocampal Volume in Male Schizophrenic Patients
Noriomi Kuroki, Marek Kubicki, Paul G. Nestor, Dean F. Salisbury, Hae-Jeong Park, James J. Levitt, Sophie Woolston, Melissa Frumin, Margaret Niznikiewicz, Carl-Fredrik Westin, Stephan E. Maier, Robert W. McCarley, Martha E. Shenton
Biological Psychiatry
2006


Weaning from Mechanical Ventilation: a Multimodal Signal Analysis
J. P. Casaseca, M. Martin-Fernandez, C. Alberola-Lopez
IEEE Transactions on Biomedical Engineering
2006
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2005
References only

Visualization of tensor fields using superquadric glyphs
DB. Ennis, G. Kindlmann, I. Rodriguez, PA. Helm, ER. McVeigh
Magnetic Resonance in Medicine
2005


Optics, Mechanics, and Hamilton-Jacobi Skeletons
S. Bouix, K. Siddiqi
Advances in Imaging and Electron Physics
2005
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Fusion and Fission
M. Barlaud, N. O. Bernsen, J. Coutaz, J.-L. Dugelay, B. Macq, M. Martin-Fernandez, L. Nigay, F. Paterno, M. Strinzis, M. Tekalp, J.-F. Thiran, D. Tzovaras, J. Vanderdonckt, S. Valoshynovskiyi
SIMILAR Dreams: Multimodal Interfaces in Our Future Live
2005
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Ten Major Achievements
M. Barlaud, N. O. Bernsen, J. Coutaz, J.-L. Dugelay, B. Macq, M. Martin-Fernandez, L. Nigay, F. Paterno, M. Strinzis, M. Tekalp, J.-F. Thiran, D. Tzovaras, J. Vanderdonckt, S. Valoshynovskiyi
SIMILAR Dreams: Multimodal Interfaces in Our Future Live
2005
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Ten Major Practical Outcomes
M. Barlaud, N. O. Bernsen, J. Coutaz, J.-L. Dugelay, B. Macq, M. Martin-Fernandez, L. Nigay, F. Paterno, M. Strinzis, M. Tekalp, J.-F. Thiran, D. Tzovaras, J. Vanderdonckt, S. Valoshynovskiyi
SIMILAR Dreams: Multimodal Interfaces in Our Future Live
2005
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Ten Major Challenges
M. Barlaud, N. O. Bernsen, J. Coutaz, J.-L. Dugelay, B. Macq, M. Martin-Fernandez, L. Nigay, F. Paterno, M. Strinzis, M. Tekalp, J.-F. Thiran, D. Tzovaras, J. Vanderdonckt, S. Valoshynovskiyi
SIMILAR Dreams: Multimodal Interfaces in Our Future Live
2005
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Uncertainty in Fiber Tractography
O. Friman, C.-F. Westin
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005
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A Hamilton-Jacobi-Bellman Approach to High Angular Resolution Diffusion Tractography
E. Pichon, C.-F. Westin, A. Tannenbaum
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005
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Two Methods for Validating Brain Tissue Classifiers
M. Martin-Fernandez, S. Bouix, L. Ungar, R. W. McCarley, M. E. Shenton
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005
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White Matter Tract Clustering and Correspondence in Populations
L. O'Donnell, C.-F. Westin
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005
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A segmentation and reconstruction technique for 3D vascular structures
V. Luboz, X. Wu, K. Krissian, C.-F. Westin, R. Kikinis, S. Cotin, S. Dawson
Eighth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, USA
2005


Riemannian Mean Curvature Flow
R. San Jose Estepar, S. Haker, C.-F. Westin
ISCV '05
2005
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Pull-push level sets: a new term to encode prior knowledge for the segmentation of teeth images
Rodrigo de Luis Garcia, Raul San Jose Estepar, Carlos Alberola-Lopez
Medical Imaging 2005: Image Processing
2005
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Local Structure Tensor for Multidimensional Signal Processing. Applications to Medical Image Analysis.
R. San Jose Estepar
PhD Dissertation
University of Valladolid, Spain
2005
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The application of dti to investigate white matter abnormalities in schizophrenia
M. Kubicki, C.-F. Westin, R. McCarley, M. E. Shenton
Ann NY Acad Sci
2005
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Group-Slicer: a Collaborative Extension of the 3D-Slicer
Federico Simmross-Wattenberg, Noemi Carranza-Herrezuelo, Cristina Palacios-Camarero, Juan Pablo Casaseca de la Higuera, Miguel Angel Martin-Fernandez, Santiago Aja-Fernandez, Juan Ruiz-Alzola, Carl-Fredrik Westin, Carlos Alberola-Lopez
Journal of Biomedical Informatics
2005


A tensor-like representation for averaging, filtering and interpolation of 3-D object orientation data
A. Brun, C.-F. Westin, S. Haker, H. Knutsson
Proceedings of the IEEE-ICIP, Genoa, Italy
2005
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Fast Manifold Learning Based on Riemannian Normal Coordinates
A. Brun, C.-F. Westin, M. Herberthson, H. Knutsson
Proceedings of the SCIA;05, Joensuu, Finland
2005


Examining the Whiteness of fMRI Noise
O. Friman, I. Morocz, C.-F. Westin
ISMRM'05, Miami, USA
2005


Speckle-Constrained Anisotropic Diffusion for Ultrasound Images
Karl Krissian, Kirby Vosburgh, Ron Kikinis, Carl-Fredrik Westin
CVPR'05, San Diego CA, USA
2005


Resampling fMRI Time Series
O. Friman, C.-F. Westin
NeuroImage
2005
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DTI and MTR Abnormalities in Schizophrenia: Analysis of White Matter Integrity
M. Kubicki, H.-J. Park, C.-F. Westin, P. Nestor, R. Mulkern, S. E. Maier, M. Niznikiewicz, E. Connor, J. Levitt, M. Frumin, R. Kikinis, F. A. Jolesz, R. McCarley, M. E. Shenton
Neuroimage
2005
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Fronto-Temporal Disconnectivity in Schizotypal Personality Disorder: A Diffusion Tensor Imaging Study
M. Nakamura, R. W. McCarley, M. Kubicki, C. C. Dickey, M. A. Niznikiewicz, M. M. Voglmaier, L. J. Seidman, S. E. Maier, C.-F. Westin, R. Kikinis, M. E. Shenton
Biological Psychiatry
2005
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Automatic Evaluation of Brain MR Segmentation Techniques by Level of Agreement
S. Bouix, M. Martin-Fernandez, L. Ungar, M. Shenton, R. McCarley
11th Annual Meeting of the Organization for the Human Brain Mapping, Toronto, ON, Canada
2005
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On Low Order Moments for the Homodyned K Distribution
M. Martin-Fernandez, C. Alberola-Lopez
Ultrasonics
2005
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An Approach for Contour Detection of Human Kidneys from Ultrasound Images using Markov Random Fields and Active Contours
M. Martin-Fernandez, C. Alberola-Lopez
Medical Image Analysis
2005
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Fast Sub-Voxel Re-initialization of the Distance Map for Level Set Methods
K. Krissian, C.-F. Westin
Pattern Recognition Letters
2005


Rigid overlay of volume sonography and MR image data
J. Verhey, and J. Wisser, T. Keller, C.-F. Westin, R. Kikinis
Computerized Medical Imaging and Graphics
2005
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Articulated Registration: Elastic Registration based on a Wire-Model
M. A. Martin-Fernandez, E. Munoz-Moreno, M. Martin-Fernandez, C. Alberola-Lopez
Medical Imaging 2005: Image Processing, San Diego, CA, USA
2005
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In Vivo Visualization of White Matter Fiber Tracts of Preterm- and Term- Infant Brain with Diffusion Tensor MRI
S.-S. Yoo, H. J. Park, J. S. Soul, H. Mamata, C.-F. Westin, H. Bassan, A. J. Du Plessis, R. L. Robertson, S. A. Ringer, S. E. Maier, J. J. Volpe, G. P. Zientara
Investigative Radiology
2005
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Capturing Intraoperative Deformations: Research Experience At The Surgical Planning Laboratory
S. K. Warfield, S. J. Haker, I.-F. Talos, C. A. Kemper, N. Weisenfeld, A. Mewes, D. Goldberg-Zimring, K. H. Zou, C.-F. Westin, W. M. Wells, C. M. C. Tempany, A. Golby, P. M. Black, F. A. Jolesz, R. Kikinis
Medical Image Analysis
2005
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Identification of translational displacements between N-dimensional data sets using the high order SVD and phase correlation
W. Scott Hoge, Carl-Fredrik Westin
IEEE Transactions on Image Processing
2005
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Kriging Filters for Multidimensional Signal Processing
J. Ruiz-Alzola, C. Alberola-Lopez, C.-F. Westin
Signal Processing
2005
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An in vivo MRI study of prefrontal cortical complexity in first episode psychosis
Laura C. Wiegand, Simon K. Warfield, James J. Levitt, Yoshio Hirayasu, Dean F. Salisbury, S. Heckers, Sylvain Bouix, Daniel Schwartz, Magdalena Spencer, Chandley C. Dickey, Ron Kikinis, Ferenc A. Jolesz, Robert W. McCarley, Martha E. Shenton
American Journal of Psychiatry
2005


Flux Driven Automatic Centerline Extraction
Sylvain Bouix, Kaleem Siddiqi, Allen Tannenbaum
Medical Image Analysis
2005


Hippocampal Shape Analysis using Medial Surfaces
Sylvain Bouix, Jens C. Pruessner, D. Louis Collins, Kaleem Siddiqi
NeuroImage
2005


2004
References only

Ein graphisches Modell zur Qualitätssicherung von Navigation
W. Freysinger, Raul San Jose Estepar, Ron Kikinis, F. Kral
Laryngo-Rhino-Otologie
2004


Clustering Fiber Traces Using Normalized Cuts
A. Brun, H. Knutsson, H. J. Park, M. E. Shenton, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag

Interface Detection in DTMRI
L. O'Donnell, W. E. L. Grimson, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag

Anisotropic Interpolation of DT-MRI Data
C. A. Castano-Moraga, M. A. Rodrigues-Florido, L. Alvarez, C.-F. Westin, J. Ruiz-Alzola
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag

Robust Generalized Total Least Squares Iterative Closest Point Registration
R. San Jose Estepar, A. Brun, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag

Bias in Resampling-Based Thresholding of Statistical Maps in fMRI
O. Friman, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag

An Analysis Tool for Quantification of Diffusion Tensor Imaging
H.-J. Park, M. E. Shenton, C.-F. Westin
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag

3D Bayesian Regularization of Diffusion Tensor MRI using Multivariate Gaussian Markov Random Fields
M. Martin-Fernandez, C.-F. Westin, C. Alberola-Lopez
Seventh International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes - Saint Malo, France
2004
Download full paper [PDF] © Springer-Verlag

A Method for the Analysis of the Geometrical Relationship between White Matter Pathology and the Vascular Architecture of the Brain
D. Kozinska, C. Holland, K. Krissian, C.-F. Westin, C. R. G. Guttmann
Neuroimage
2004
Download full paper [PDF] © Elsevier

White Matter Hemisphere Asymmetries in Healthy Subjects and in Schizophrenia: A Diffusion Tensor MRI Study
H. J. Park, C.-F. Westin, M. Kubicki, S. E. Maier, M. Niznikiewicz, A. Baer, M. Frumin, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Neuroimage
2004
Download full paper [PDF] © Elsevier

Detection and Detrending in Functional MRI Data Analysis
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2004
Download full paper [PDF] © Elsevier

Comments on: A Methodology for Evaluation of Boundary Detection Algorithms on Medical Images
C. Alberola-Lopez, M. Martin-Fernandez, J. Ruiz-Alzola
IEEE Transactions on Medical Imaging
2004
Download full paper [PDF] © IEEE

Subspace Models for Functional MRI Data Analysis
O. Friman
ISBI'04, Arlington, VA, USA
2004
Download full paper [PDF] © ISBI04

A novel approach to averaging, filtering and interpolation of 3-D object orientation data
A. Brun, C.-F. Westin, S. Haker, H. Knutsson
Proceedings of the Swedish Symposium on Image Analysis, Uppsala, Sweden
2004


Method for Combining Information from White matter Fiber Tracking and Gray Matter Parcellation
H. J. Park, M. Kubicki, C.-F. Westin, I. F. Talos, A. Brun, S. Pieper, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
American Journal of Neuroradiology
2004
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Biexponential Diffusion Tensor Analysis of Human Brain Diffusion Data
S. E. Maier, S. Vajapeyam, H. Mamata, C.-F. Westin, F. A. Jolesz, R. V. Mulkern
Magnetic Resonance in Medicine
2004
Download full paper [PDF] © Wiley

Comparison of Single-shot Echo-planar and Line Scan Protocols for Diffusion Tensor Imaging
M. Kubicki, S. E. Maier, C.-F. Westin, H. Mamata, H. Ersner-Hershfield, R. San Jose Estepar, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Academic Radiology
2004
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Shape of the Caudate Nucleus and its Cognitive Correlates in Neuroleptic-Naive Schizotypal Personality Disorder
J. J. Levitt, C.-F. Westin, P. G. Nestor, R. San Jose Estepar, C. C. Dickey, M. M. Voglmaier, L. J. Seidman, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Biological Psychiatry
2004
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Fast Sub-voxel Reinitialization of the Distance Map for Level Set Methods
Karl Krissian, Carl-Fredrik Westin
Report 0001, Department of Radiology, Brigham and Women's Hospital, Harvard Medical School
2004
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Using 3D Convex Hulls to Detect Coronary Artery Stenoses and Atherosclerotic Vessel Wall Lesions in Contrast Enhanced MDCT Images
Arne Hans, Karl Krissian, U. Joseph Schoepf, Ron Kikinis, Carl-Fredrik Westin
Report 0002, Department of Radiology, Brigham and Women's Hospital, Harvard Medical School
2004
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Algorithms for Extracting Vessel Centerlines
Karl Krissian, Ron Kikinis, Carl-Fredrik Westin
Report 0003, Department of Radiology, Brigham and Women's Hospital, Harvard Medical School
2004
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Anisotropic Diffusion of Ultrasound Constrained by Speckle Noise Model
Karl Krissian, Kirby Vosburgh, Ron Kikinis, Carl-Fredrik Westin
Report 0004, Department of Radiology, Brigham and Women's Hospital, Harvard Medical School
2004
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Anatomical Guided Segmentation with Non-Stationary Tissue Class Distributions in an Expectation-Maximization Framework
Kilian Pohl, W. Eric L. Grimson, Sylvain Bouix, Ron Kikinis
ISBI, Arlington, VA, USA
2004


An Elliptic PDE Approach for Shape Characterization
Haissam Haidar, Sylvain Bouix, James Levitt, Robert W. McCarley, Martha E. Shenton, Janet S. Soul
EMBS, san Francisco, CA, USA
2004


Characterizing the Shape of Anatomical Structures with Poisson's Equation
Haissam Haidar, Sylvain Bouix, James Levitt, Chandley C. Dickey, Robert W. McCarley, Martha E. Shenton, Janet S. Soul
MICCAI, Saint Malo, France
2004


Evaluating Automatic Brain Tissue Classifiers
Sylvain Bouix, Lida Ungar, Chandlee C. Dickey, Robert W. McCarley, Martha E. Shenton
MICCAI, Saint Malo, France
2004


2003
References only

Subspace identification extension to the phase correlation method
W. Scott Hoge
IEEE Transactions on Medical Imaging
2003
Download full paper [PDF] © IEEE

Adaptive Analysis of Functional MRI Data
O. Friman
PhD Dissertation
Linköping University, Sweden
2003
Download full paper [PDF]

Adaptive Analysis of fMRI Data
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2003
Download full paper [PDF] © Elsevier

Level set-based integration of segmentation and computational fluid dynamics for flow correction in phase contrast angiography.
M. Watanabe, R. Kikinis, C.-F. Westin
Academic Radiology
2003
Download full paper [PDF]

Spatial Normalization of Diffusion Tensor MRI Using Multiple Channels
H. J. Park, M. Kubicki, M. E. Shenton, A. Guimond, R. W. McCarley, S. E. Maier, R. Kikinis, F. A. Jolesz, C.-F. Westin
Neuroimage
2003
Download full paper [PDF] © Elsevier

A Theoretical Framework to Three-Dimensional Ultrasound Reconstruction from Irregularly-Sample Data
R. San Jose Estepar, M. Martin-Fernandez, P.P. Caballero-Martinez, C. Alberola-Lopez, J. Ruiz-Alzola
Ultrasound in Medicine and Biology
2003
Download full paper [PDF] © Elsevier

Cingulate Fasciculus Integrity Disruption in Schizophrenia: A Magnetic Resonance Diffusion Tensor Imaging Study
M. Kubicki, C.-F. Westin, S. E. Maier, H. Mamata, M. Frumin, H. Ernst-Hirshefeld, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Biological Psychiatry
2003
Download full paper [PDF] © Society of Biological Psychiatry

Homomorphic Filtering of DT-MRI Fields
C. A. Castano-Moraga, C.-F. Westin, J. Ruiz-Alzola
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Montreal, Canada
2003
Download full paper [PDF] © Springer-Verlag

Freehand Ultrasound Reconstruction Based on ROI Prior Modeling and Normalized Convolution
R. San Jose Estepar, M. Martin-Fernandez, C. Alberola-Lopez, J. Ellsmere, R. Kikinis, C.-F. Westin
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Lecture Notes in Computer Science 2879, Montreal, Canada
2003
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Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image Guided Neurosurgery
I. F. Talos, L. O'Donnell, C.-F. Westin, S. K. Warfield, W. M. Wells, S. S. Yoo, L. Panych, A. Golby, H. Mamata, S. E. Maier, P. Ratiu, C. G. Guttmann, P. Mc. L. Black, F. A. Jolesz, R. Kikinis
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Montreal, Canada
2003
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Regularization of Diffusion Tensor Maps Using a Non-Gaussian Markov Random Field Approach
M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola, C.-F. Westin
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Lecture Notes in Computer Science 2879, Montreal, Canada
2003
Download full paper [PDF] © Springer-Verlag

Tensor Splats: Visualising Tensor Fields by Texture Mapped Volume Rendering
A. Bhalerao, C.-F. Westin
CIMIT, Montreal, Canada
2003
Download full paper [PDF] © Springer-Verlag

Geostatistical Medial Image Registration
J. Ruiz-Alzola, E. Suarez, C. Alberola-Lopez, S. K. Warfield, C.-F. Westin
Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'03), Montreal, Canada
2003
Download full paper [PDF] © Springer-Verlag

Registration of multi-dimensional image data via sub-pixel resolution phase correlation
W. S. Hoge, D. Mitsouras, F. R. Rybicki, R. V. Mulkern, C.-F. Westin
ICIP, Barcelona, Spain
2003
Download full paper [PDF] © ICIP03

A Fully Automatic Algorithm for Contour Detection of Bones in Hand Radiographs using Active Contours
R. de-Luis, M. Martin-Fernandez, M. Martin, C. Alberola-Lopez
Proceedings of the IEEE International Conference on Image Processing (ICIP'03), Barcelona, Spain
2003
Download full paper [PDF] © IEEE

Multiscale Segmentation of the Aorta in 3D Ultrasound Images
K. Krissian, J. Ellsmere, K. Vosburgh, R. Kikinis, C.-F. Westin
EMBS, Cancun, Mexico
2003
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A Model-Based Algorithm for the Automatic Segmentation of Metacarpals in Hand-Wrist Radiographs using Active Contours
R. de-Luis, M. Martin-Fernandez, M. Martin, C. Alberola-Lopez
Proceedings of the Third Annual Meeting of the International Society for Computer Assisted Orthopaedic Surgery (CAOS'03), Marbella, Spain
2003
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Diffusion tensor visualization using random field correlation and volume rendering
Andreas Sigfridsson, Raul San Jose Estepar, Lars Wigstrom, Carlos Alberola-Lopez, Carl-Fredrik Westin
Proc. of th 9th International Workshop on Computer Aided Systems Theory, Las Palmas de Gran Canaria, Spain
2003


Shape Alignment based on Phase Spectrum and ICA
Raul San Jose Estepar, Carlos Alberola-Lopez, Juan Ruiz-Alzola, Ron Kikinis, Carl-Fredrik Westin
Computer Aided Systems Theory (EUROCAST'03), Las Palmas de Gran Canaria, Spain
2003


Fast and Accurate Redistancing for Level Set Methods
Karl Krissian, Carl-Fredrik Westin
EUROCAST, Las Palmas de Gran Canaria, Spain
2003
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Tensor field regularization using normalized convolution
Carl-Fredrik Westin, Hans Knutsson
Computer Aided Systems Theory (EUROCAST'03), LNCS 2809, Las Palmas de Gran Canaria, Spain
2003
Download full paper [PDF] © Spinger-Verlag

Anisotropic Regularization of Posterior Probability Maps Using Vector Space Projections
M. A. Rodriguez-Florido, R. Cardenes, C.-F. Westin, C. Alberola-Lopez, J. Ruiz-Alzola
Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
Download full paper [PDF] © SpringerVerlag

Fast Entropy-Based Nonrigid Registration
E. Suarez, J. A. Santana, Eduardo Rovaris, C.-F. Westin, J. Ruiz-Alzola
Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
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A Novel Gauss-Markov Random Field Approach for Regularization of Diffusion Tensor Maps
M. Martin-Fernandez, R. San Jose Estepar, C.-F. Westin, C. Alberola-Lopez
Ninth International Conference on Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
Download full paper [PDF] © Springer-Verlag

A Novel Gauss-Markov Random Field Approach for Regularization of Diffusion Tensor Maps
M. Martin-Fernandez, R. San Jose Estepar, C.-F. Westin, C. Alberola-Lopez
Abstracts of the Ninth International Conference on Computer Aided Systems Theory (EUROCAST'03), Las Palmas de Gran Canaria, Spain
2003
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Coloring of DT-MRI FIber Traces using Laplacian Eigenmaps
Anders Brun, Hae-Jeong Park, Hans Knutsson, Carl-Fredrik Westin
Computer Aided Systems Theory (EUROCAST'03), Lecture Notes in Computer Science 2809, Las Palmas de Gran Canaria, Spain
2003
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Automatic Bone Age Assessment: A Registration Approach
M. Martin, M. Martin-Fernandez, C. Alberola-Lopez
Medical Imaging 2003: Image Processing, San Diego, CA, USA
2003
Download full paper [PDF] © SPIE

Capturing Brain Deformation
Simon K. Warfield, Florin Talos, Corey Kemper, Lauren O'Donnell, Carl-Fredrik Westin, William M. Wells, Peter Mc L. Black, Ferenc A. Jolesz, Ron Kikinis
Surgery Simulation and Soft Tissue Modeling, International Symposium, IS4TM 2003, LNCS 2673, Juan-Les-Pins, France
2003


Medial Surfaces
Sylvain Bouix
PhD Dissertation
School of Computer Science, McGill University
2003


Flux Driven Fly Throughs
Sylvain Bouix, Kaleem Siddiqi, Allen Tannenbaum
Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'03), Madison, WI, USA
2003


2002
References only

Recognizing Emphysema - A Neural Network Approach
O. Friman, M. Borga, M. Lundberg, U. Tylén, H. Knutsson
ICPR'02
2002
Download full paper [PDF]

Hierarchical Temporal Blind Source Separation of fMRI Data
O. Friman, M. Borga, P. Lundberg, H. Knutsson
ISMRM'02, Honolulu, Hawaii
2002
Download full paper [PDF]

Detecting Neural Activity in fMRI using Maximum Correlation Modeling
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2002
Download full paper [PDF] © Elsevier

Exploratory fMRI Analysis by Autocorrelation Maximization
O. Friman, M. Borga, P. Lundberg, H. Knutsson
NeuroImage
2002
Download full paper [PDF] © Elsevier

Diffusion Tensor Imaging And Its Application To Neuropsychiatric Disorders
M. Kubicki, C.-F. Westin, S. E. Maier, H. Mamata, M. Frumin, H. Ernst-Hirshefeld, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
Harvard Rev of Psychiatry
2002
Download full paper [PDF] © 2002 President and Fellows of Harvard College

Uncinate Fasciculus Findings in Schizophrenia: A Magnetic Resonance Diffusion Tensor Imaging Study
M. Kubicki, C.-F. Westin, S. E. Maier, M. Frumin, P. G. Nestor, D. Salisbury, R. Kikinis, F. A. Jolesz, R. W. McCarley, M. E. Shenton
AmJPsych
2002
Download full paper [PDF]

High-Resolution Line-Scan Diffusion-Tensor MRI of White Matter Fiber Tract Anatomy
H. Mamata, Y. Mamata, C.-F. Westin, M. E. Shenton, F. A. Jolesz, S. E. Maier
American Journal of NeuroRadiology
2002
Download full paper [PDF] © American Society of Neuroradiology

Processing and Visualization of Diffusion Tensor MRI
C.-F. Westin, S. E. Maier, H. Mamata, A. Nabavi, F. A. Jolesz, R. Kikinis
Medical Image Analysis
2002
Download full paper [PDF] © Elsevier

Nonrigid Registration of 3D Tensor Medical Data
J. Ruiz-Alzola, C.-F. Westin, S. K. Warfield, C. Alberola, S. E. Maier, R. Kikinis
Medical Image Analysis
2002
Download full paper [PDF] © Elsevier

Magnetic Resonance Diffusion Tensor Imaging - A Tool for Non-invasive exploration of neuroanatomy
S. E. Maier, H. Mamata, C.-F. Westin, R. V. Mulkern
International Symposium for Young Researchers on 'Modeling and their Applications 2002' (IA'02), Osaka, Japan
2002


Flux-based Anisotropic Diffusion Applied to Enhancement of 3D Angiograms
K. Krissian
IEEE Transactions on Medical Imaging
2002


A Bayesian Approach to in vivo Kidney Ultrasound Contour Detection
M. Martin-Fernandez, C. Alberola-Lopez
MICCAI, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag

Nonridgid Registration using Regularized Matching Weighted by Local Structure
E. Suarez, C.-F. Westin, E. Rovaris, J. Ruiz-Alzola
MICCAI, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag

Intra-patient Prone to Supine Colon Registration for Synchronized Colonoscopy
D. Nain, S. Haker, W. E. L. Grimson, E. Cosman Jr., W. M. Wells, H. Ji, R. Kikinis, C.-F. Westin
MICCAI, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag

Level Set Based Integration of Segmentation and Computational Fluid Dynamics for Flow Correction in Phase Contrast Angiography
M. Watanabe, R. Kikinis, C.-F. Westin
MICCAI, Tokyo, Japan
2002
© Springer-Verlag

New Approaches to Estimation of White Matter Connectivity in Diffusion Tensor MRI: Elliptic PDEs and Geodesics in a Tensor-Warped Space
L. O'Donnell, S. Haker, C.-F. Westin
MICCAI'02, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag

Regularized Stochastic White Matter Tractography Using Diffusion Tensor MRI
M. Björnemo, A. Brun, R. Kikinis, C.-F. Westin
MICCAI'02, Tokyo, Japan
2002
Download full paper [PDF] © Springer-Verlag

Deformable registration of DT-MRI data based on transformation invariant tensor characteristics
A. Guimond, C. R. G. Guttmann, S. K. Warfield, C.-F. Westin
ISBI, Washington (DC), USA
2002
Download full paper [PDF]

Deformable registration of DT-MRI data based on invariant tensor characteristics
A. Guimond, C.-F. Westin, L. P. Panych, C. R. G. Guttmann
HBM, Sendai, Japan
2002


White Matter Tractography Using Sequential Importance Sampling
A. Brun, M. Björnemo, R. Kikinis, C.-F. Westin
Proceedings of the ISMRM Annual Meeting (ISMRM'02), Honolulu, Hawaii
2002
Download full paper [PDF]

Angle-Preserving Mappings for the Visualization of Multi-branched Vessels
Lei Zhu, Sylvain Bouix, Steven Haker, Kaleem Siddiqi, Allen Tannenbaum
ICIP, Rochester, NY
2002


Hamilton-Jacobi Skeletons
Kaleem Siddiqi, Sylvain Bouix, Allen Tannenbaum, Steven W. Zucker
International Journal of Computer Vision
2002


2001
References only

Reshaping polygonal meshes with smoothed normals extracted from Ultrasound volume data : an optimization approach
Raul San Jose Estepar, Carlos Alberola-Lopez, Juan Ruiz
SPIE, San Diego, USA
2001
Download full paper [PDF] © SPIE

Semi-Automatic Medical Image Segmentation
Lauren O'Donnell
2001
Download full paper [PDF]

An Integrated Visualization System for Surgical Planning and Guidance Using Image Fusion and an Open MR
David T. Gering MS, Arya Nabavi MD, Ron Kikinis, Lauren J. O'Donnell BS, W. Eric L. Grimson PhD, Ferenc Peter M. Black MD, William M. Wells III. PhD
Journal od Magentic Resonance Imaging
2001
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Maximum Likelihood Contour Estimation using Beta-Statistics in Ultrasound Images
Marcos Martin-Fernandez, Raul San Jose Estepar, Carlos Alberola-Lopez
Proceedings of the IEEE-EURASIP Image and Signal Processing and Analysis (ISPA'01), Pula, Croatia
2001
Download full paper [PDF] © IEEE

Detection of neural activity in functional MRI using Canonical Correlation Analysis
O. Friman, J. Carlsson, P. Lundberg, M. Borga, H. Knutsson
Magnetic Resonance in Medicine
2001
Download full paper [PDF] © Wiley

Detection of Landmarks in Multidimensional Tensor Data
J. Ruiz-Alzola, R. Kikinis, C.-F. Westin
Signal Processing
2001
Download full paper [PDF] © Elsevier

CURVES: Curve Evolution for Vessel Segmentation
L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, R. Keriven, R. Kikinis, A. Nabavi, C.-F. Westin
Medical Image Analysis
2001


Three-dimensional Adaptive Filtering in Magnetic Resonance Angiography
C.-F. Westin, L. Wigström, T. Loock, L. Sjökvist, R. Kikinis, H. Knutsson
Journal of Magnetic Resonance Imaging
2001
Download full paper [PDF] © Wiley

Serial Intraoperative MR Imaging of Brain Shift
A. Nabavi, P. Mc. L. Black, D. T. Gering, C.-F. Westin, V. Metha, R. S. Pergolizzi, Jr., M. Ferrant, S. K. Warfield, N. Hata, R. B. Schwarts, W. M. Wells, R. Kikinis, F. A. Jolesz
Neurosurgery
2001
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General Approach to Nonrigid Registration: Decoupled Optimization
E. Suarez, R. Cardenes, C. Alberola, C.-F. Westin, J. Ruiz-Alzola
23rd Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC '01)
2001


Artifact reduction in sinc interpolation using adaptive filtering
M. A. Rodrigues-Florido, J. Ruiz-Alzola, C.-F. Westin
Proc. IEEE International Conf on Image Processing, Thessaloniki, Greece
2001


Phase-driven Finite Element Model for Spatio-temporal Tracking in Tagged Cardiac MRI
I. Haber, R. Kikinis, C.-F. Westin
MICCAI, Utrecht, Netherlands
2001
Download full paper [PDF] © Springer-Verlag

Phase-Based User-Steered Image Segmentation
L. O'Donnell, C.-F. Westin, W. E. L. Grimson, J. Ruiz-Alzola, M. E. Shenton, R. Kikinis
MICCAI, Utrecht, Netherlands
2001
Download full paper [PDF] © Springer-Verlag

Comparison of Two Restoration Techniques in the Context of 3D Medical Imaging
M. A. Rodrigues-Florido, K. Krissian, J. Ruiz-Alzola, C.-F. Westin
MICCAI, Utrecht, Netherlands
2001
Download full paper [PDF] © Springer-Verlag

Contributions to Automatic and Semiautomatic Analysis of Three-Dimensional Fetal Echography using Active Contours and Markov Random Fields
M. Martin-Fernandez
PhD Dissertation
Valladolid University, Spain
2001
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Morphometric Magnetic Resonance Imaging studies: Findings in Schizophrenia
M. E. Shenton, M. Frumin, R. W. McCarley, S. E. Maier, C.-F. Westin, I. A. Fischer, C. Dickey, R. Kikinis
Psychiatric Neuroimaging Research: Contemporary Strategies
2001


Hippocampal Shape Analysis Using Medial Surfaces
Sylvain Bouix, Jens C. Pruessner, D. Louis Collins, Kaleem Siddiqi
MICCAI, Utrecht, The Netherlands
2001


2000
References only

Kalman filter technique applied to surface reconstruction and visualization from noisy volume data
Raul San Jose Estepar, Alberto Rivera, Marco Pinacho, Carlos Alberola-Lopez, Juan Ruiz
SPIE, San Diego, USA
2000
Download full paper [PDF] © SPIE

Sensitivity Profiles from an Array of Coils for Encoding and Reconstruction in Parallel (SPACE RIP)
W. E. Kyriakos, L. P. Panych, D. F. Kacher, C.-F. Westin, S. M. Bao, R. V. Mulkern, F. A. Jolesz
Magnetic Resonance in Medicine
2000


Intraoperative MRI for the resection of intracranial vascular malformation
A. Nabavi, R. S. Pergolizzi Jr RS, C. Martin, R. B. Schwartz, R. M. Friedlander, D. Kacher, C.-F. Westin, R. Kikinis, E. Alexander III, P. Mc. L. Black, F. A. Jolesz, P. E. Stieg
Stroke
2000


Tissue Classification Based on 3D Local Intensity Structure for Volume Rendering
Y. Sato, C.-F. Westin, A. Bhalerao, S. Nakajima, N. Shiraga, S. Tamura, R. Kikinis
IEEE Trans on Visualization and Computer Graphics
2000
Download full paper [PDF] © IEEE

Cingulum Bundle in Schizophrenics: Diffusion Tensor Study
M. R. Kubicki, C.-F. Westin, R. W. McCarley, S. E. Maier, R. Kikinis, M. E. Shenton
Supplement to Radiology
2000


Nonrigid Registration of 3D Scalar Vector and Tensor Medical Data
J. Ruiz-Alzola, C.-F. Westin, S. K. Warfield, A. Nabavi, R. Kikinis
Proceedings of MICCAI 2000, Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh
2000
Download full paper [PDF] © Springer-Verlag

diSNei: A Collaborative Environment for Medical Images Analysis and Visualization
C. Alberola-Lopez, R. Cardenes, M. Martin-Fernandez, M. Martin, M. A. Rodriguez-Florido, J. Ruiz-Alzola
MICCAI, Pittsburgh, PA, USA
2000
Download full paper [PDF] © Springer-Verlag

Segmentation by Adaptive Geodesic Active Contours
C.-F. Westin, L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, S. Dawson, A. Norbash, R. Kikinis
Proceedings of MICCAI 2000, Third International Conference on Medical Image Computing and Computer-Assisted Intervention, Pittsburgh
2000
Download full paper [PDF] © Springer-Verlag

A Coding Technique with Progressive Reconstruction Based on VQ and Entropy Coding Applied to Medical Images
M. Martin-Fernandez, C. Alberola-Lopez, D. Guerrero, J. Ruiz-Alzola
Applications of Digital Image Processing XXIII, Proceedings of the SPIE 4115, San Diego, CA, USA
2000
Download full paper [PDF] © SPIE

Energy Functions for the Segmentation of Ultrasound Volume Data using Active Rays
M. Martin-Fernandez, E. Rodriguez, D. Tejada, C. Alberola-Lopez, J. Ruiz-Alzola
Proceedings of the IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'00), Istanbul, Turkey
2000
Download full paper [PDF] © IEEE

Affine Adaptive Filtering of CT Data
C.-F. Westin, J. Richolt, V. Moharir, R. Kikinis
Medical Image Analysis
2000
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Image Guided Surgery
W. E. L. Grimson, M. Leventon, L. M. Lorigo, T. Kapur, O. D. Faugeras, R. Kikinis, R. Keriven, A. Nabavi, C.-F. Westin
Fourth International Workshop on Algorithmic Foundations of Robotics (WAFR), Hanover, NH, USA
2000


Co-Dimension 2 Geodesic Active Contours
L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, R. Keriven, R. Kikinis, C.-F. Westin
Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'02), South Carolina, USA
2000


Physics-Based Skeletons
Sylvain Bouix, Pavel Dimitrov, Kaleem Siddiqi
Vision Interface, Montreal, Canada
2000


Divergence-Based Medial Surfaces
Sylvain Bouix, Kaleem Siddiqi
ECCV, Dublin, Ireland
2000


1999
References only

Multi-component apparent diffusion coefficients in human brain
R. V. Mulkern, H. Gudbjartsson, C.-F. Westin, H. P. Zengigonul, W. Gartner, C. R. G.Guttmann, R. Robertson, W. Kyriakos, R. Schwartz, D. Holtzman, F. A. Jolesz, S. E. Maier
NMR Biomedicine
1999


A Novel Error Criterion for Multi-Resolution Volume Data Compression
M. Martin, M. Martin-Fernandez, C. Alberola-Lopez, J. Ruiz-Alzola
Proceedings of the IEEE First Joint Conference of the Biomedical Engineering Society and the Engineering in Medicine and Biology Society (BMES/EMBS'99), Atlanta, GA, USA
1999
Download full paper [PDF] © IEEE

Image Processing for Diffusion Tensor Magnetic Resonance Imaging
C.-F. Westin, S. E. Maier, B. Khidhir, P. Everett, F. A. Jolesz, R. Kikinis
Medical Image Computing and Computer-Assisted Intervention
1999
Download full paper [PDF] © Springer-Verlag

Fractional Segmentation of White Matter
S. K. Warfield, C.-F. Westin, C. R. G. Guttmann, M. Albert, F. A. Jolesz, R. Kikinis
Proceedings of MICCAI'99, Second International Conference on Medical Image Computing and Computer-Assisted Intervention, 1999
1999
© Springer-Verlag

Co-Dimension 2 Geodesic Active Contours for MRA Segmentation
L. M. Lorigo, O. D. Faugeras, W. E. L. Grimson, R. Keriven, R. Kikinis, C.-F. Westin
Int'l Conf. Information Processing in Medical Imaging (IPMI'99), Visegr\'ad, Hungary
1999
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The Hamilton-Jacobi Skeleton
Kaleem Siddiqi, Sylvain Bouix, Allen Tannenbaum, Steven W. Zucker
ICCV, Corfu, Greece
1999


Real Time Video Scene Detection and Classification
John M. Gauch, Susan Gauch, Sylvain Bouix, Xiaolan Zhu
Information processing and Management
1999


1998
References only

Magnetic Resonance Imaging Shows Orientation and Asymmetry of White Matter Tracts
S. Peled, H. Gudbjartsson, C.-F. Westin, R. Kikinis, F. A. Jolesz
Brain Research
1998
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Tensor Controlled Local Structure Enhancement of CT Images for Bone Segmentation
C.-F. Westin, S. Warfield, A. Bhalerao, L. Mui, J. Richolt, R. Kikinis
MICCAI
1998
© Springer-Verlag

High Performance Computing in Medical Image Analysis at the Surgical Planning Laboratory
R. Kikinis, S. K. Warfield, C.-F. Westin
High Performance Computing Asia'98, Singapore
1998


3D modelling of the chest in patients with implanted cardiac defibrillator for further bioelectrical simulation
J. Kettenbach, A. G. Schreyer, S. Okuda, M. D. Sweeney, S. Eisenberg, C.-F. Westin, F. Jacobson, R. Kikinis, B. H. KenKnight, F. A. Jolesz
Proceedings of Computer Assisted Radiology, Tokyom Japan
1998


VISION: Segmentation, Indexing and Retrieval of Digital Videos
Sylvain Bouix
1998


1997
References only

A DSP Implementation of Wavelet Transform to Detect Epileptiform Activity in the EEG
R. Hornero, M. Martin-Fernandez, A. Alonso, A. Izquierdo, M. Lopez
Proceedings of the Eighth Annual International Conference on Signal Processing Applications and Technology (ICAPAT'97), San Diego, CA, USA
1997
Download full paper [PDF]

Tissue classification based on 3D local intensity structures for volume rendering
Y. Sato, C.-F. Westin, A. Bhalerao, S. Nakajima, N. Shiraga, S. Yoshida, R. Kikinis
Proc. JAMIT Frontier '97, Suita, Japan
1997


Using Local 3D Structure for Segmentation of Bone from Computer Tomography Images
C.-F. Westin, A. Bhalerao, H. Knutsson, R. Kikinis
CVPR, Puerto Rico
1997
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Geometrical Diffusion Measures for MRI from Tensor Basis Analysis
C.-F. Westin, S. Peled, H. Gudbjartsson, R. Kikinis, F. A. Jolesz
ISMRM '97, Vancouver Canada
1997
Download full paper [PDF]

Unwrapping Phase in 3D MR Phase Contrast Angiograms
A. Bhalerao, C.-F. Westin, R. Kikinis
1st Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine and Medical Robotics and Computer-Assisted Surgery, CVRMED/MRCAS '97, Grenoble France
1997


1996
References only

Object Tracking Based on the Orientation Tensor Concept
J. Karlholm, C.-J. Westelius, C.-F. Westin, H. Knutsson
Theory and Applications of Image Analysis II
1996


Attention Control in Robot Vision
C.-F. Westin, C.-J. Westelius, H. Knutsson, G. H. Granlund
IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR '96), San Francisco
1996


1995
References only

Tracking Based on the Orientation Tensor Concept
J. Karlholm, C.-J. Westelius, C.-F. Westin, H. Knutsson
Proceeding of 9th SCIA, Uppsala, Sweden
1995


Phase-based Disparity Estimation
C.-J. Westelius, H. Knutsson, J. Wiklund, C.-F. Westin
Vision as Process
1995


Line Extraction using Tensors
C.-F. Westin, H. Knutsson
Vision as Process
1995


Advanced Image Processing: Introduction and Background
C.-F. Westin, G. Granlund, H. Knutsson
Vision as Process
1995


1994
References only

Prototyping, Visualization and Simulation Using the Application Visualization System
C.-J. Westelius, J. Wiklund, C.-F. Westin
Experimental Environments for Computer Vision and Image Processing
1994


Object Tracking Based on the Orientation Tensor Concept
J. Karlholm, C.-J. Westelius, C.-F. Westin, H. Knutsson
Report LiTH-ISY-R-1658, Computer Vision Laboratory
1994


A Tensor Framework for Multidimensional Signal Processing
C.-F. Westin
PhD Dissertation
Linköping University, Sweden
1994
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Local Multiscale Frequency and Bandwidth Estimation
H. Knutsson, C.-F. Westin, G. H. Granlund
IEEE International Conference on Image Processing (ICIP'94), Austin, Texas
1994


ESPRIT Basic Research Action 7108, Vision as Process, DR.B.2: Integration of Multi-level Control Loops and FOA
C.-F. Westin, C.-J. Westelius, J. Wiklund, H. Knutsson, G. Granlund
Report, Computer Vision Laboratory
1994


Estimation of Motion Vector Fields using Tensor Field Filtering
C.-F. Westin, H. Knutsson
Proceedings of IEEE International Conference on Image Processing (ICIP'94), Austin, Texas
1994


On the Equivalence of Normalized Convolution and Normalized Differential Convolution
C.-F. Westin, K. Nordberg, H. Knutsson
Proceedings of IEEE International Conference on Acoustics, Speech, & Signal Processing (ICASSP'94), Adelaide, Australia
1994


Processing Incomplete and Uncertain Data using Subspace Methods
C.-F. Westin, H. Knutsson
Proceedings of 12th International Conference on Pattern Recognition (ICPR'94), Jerusalem, Israel
1994


1993
References only

ESPRIT Basic Research Action 7108, Vision as Process, DR.B.1: Integration of Low-level FOA & Control Mechanisms
C.-F. Westin, C.-J. Westelius
Report, Computer Vision Laboratory
1993


AVS, Application Visualization System, Software Evaluation Report
J. Wiklund, C.-F. Westin, C.-J. Westelius
Report LiTH-ISY-R-1469, Computer Vision Laboratory
1993


Normalized and Differential Convolution: Methods for Interpolation and Filtering of Incomplete and Uncertain data
H. Knutsson, C.-F. Westin
Proceedings of Computer Vision and Pattern Recognition (CVPR'93), New York City, USA
1993
Download full paper [PDF]

Normalized Convolution: A Technique for Filtering Incomplete and Uncertain Data
H. Knutsson, C.-F. Westin
Proceedings of the 8th Scandinavian Conference on Image Analysis, Tromsö, Norway
1993


1992
References only

ESPRIT Basic Research Action 3038, Vision as Process, DR.A.2.1: Model Support and Local FOA Control
C.-F. Westin
Report, Computer Vision Laboratory
1992


Extraction of Local Symmetries using Tensor Field Filtering
C.-F. Westin, H. Knutsson
Proceedings of 2nd Singapore International Conference on Image Processing
1992
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The Möbius Strip Parameterization for Line Extraction
C.-F. Westin, H. Knutsson
In Proceedings of Second European Conference on Computer Vision ECCV'92, Santa Margherita Ligure, Italy
1992


1991
References only

Line Segmentation by Clustering in Möbius-Hough Space
C.-F. Westin, H. Knutsson
Report LiTH-ISY-I-1221, Computer Vision Laboratory
1991


Feature Extraction Based on a Tensor Image Description
C.-F. Westin
Lic Thesis
Linköping University
1991


The Möbius Strip Parameterization for Line Segmentation
C.-F. Westin, H. Knutsson
Proceedings of the SSAB Symposium on Image Analysis, Stockholm
1991


ESPRI Basic Research Action 3038, Vision as Process, DR.A.1.2: Definition of feature generating procedures
C.-F. Westin, H. Knutsson
Report, Computer Vision Laboratory
1991


1990
References only

A Parameter Mapping for Line Segmentation
C.-F. Westin, H. Knutsson
Report LiTH-ISY-I-1151, Computer Vision Laboratory
1990


1989
References only

A Colour Representation for Scale-spaces
C.-J. Westelius, C.-F. Westin
Proceedings of 6th SCIA, Oulu, Finland
1989


Brain chaos. A feature or a bug?
C.-F. Westin, C.-J. Westelius
Report LiTH-ISY-I-0990, Computer Vision Laboratory
1989


1988
References only

A Colour Model for Hierarchical Image Processing
C.-F. Westin
1988